[gmx-users] removal of the initial periodicity by editconf

[Justin Lemkul]

On 6/22/13 8:59 AM, Andrew Bostick wrote:
> Excuse me.
>
> when I use
>
> grompp -f minim.mdp -c dppc128.gro -p topol_dppc.top -o em.tpr
>
> I encounter with
>
> Fatal error:
> Unknown atomtype OW
>

Apparently something has gone wrong when editing the force field files.  I don't 
know what would have led you to remove OW, though.  Please go back and follow 
the procedure very carefully.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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