[gmx-users] Use dihedraltype 4 to allow several multiplicity terms
Steven Neumann
s.neumann08 at gmail.com
Thu Mar 7 16:46:46 CET 2013
Dear Gmx Users,
I used charmm server to get the parameters for my new molecule -
alkane. i converted it into the gromacs topology.
When I try grompp:
WARNING 1 [file ffbonded.itp, line 7948]:
Overriding Proper Dih. parameters.
Use dihedraltype 4 to allow several multiplicity terms.
old: 0 0.159787 2 0 0.159787 2
new: CG331 CG321 CG321 CG331 9 0.00
0.1598288 2
WARNING 2 [file ffbonded.itp, line 7949]:
Overriding Proper Dih. parameters.
Use dihedraltype 4 to allow several multiplicity terms.
old: 0 0.159829 2 0 0.159829 2
new: CG331 CG321 CG321 CG331 9 180.00
0.1330512 6
My ffnonbonded.itp corresponding lines:
[ dihedraltypes ]
; i j k l func phi0 cp mult
CG331 CG321 CG321 CG331 9 0.00
0.1598288 2
CG331 CG321 CG321 CG331 9 180.00 0.1330512 6
Can you please explain me this? Shall use 4 instead of 2 or 6 at the
end of these lines?
I am using Gromacs 4.5.5
Stevem
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