[gmx-users] No group in index file?

[Justin Lemkul]

On 10/31/13 3:59 PM, Riccardo Concu wrote:
> Dear Xu,
> you have to use the make_ndx option if I'm not wrong.
> The syntax should be make_ndx -f xxx.gro -o index.ndx

make_ndx is not particularly useful for angles.  To get it to recapitulate the 
function of mk_angndx, it's as much work as writing the index file by hand.

-Justin

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Justin A. Lemkul, Ph.D.
Postdoctoral Fellow

Department of Pharmaceutical Sciences
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jalemkul at outerbanks.umaryland.edu | (410) 706-7441

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