[gmx-users] NMR restrained MD

[Justin Lemkul]

On 9/7/13 6:40 PM, Rama Krishna Koppisetti wrote:
> Hi Justin,
>
> I use similar procedure as you mentioned in the tutorial to generate my
> topologies for protein and bilayer. there is no .rtp file for lipid. Is
> there any reference to include lipid molecule in aminoacid.rtp file.
>

Read the manual and look at existing examples.  The .rtp format is very similar 
to the standard topology (.top/.itp) format, probably even a bit more 
straightforward.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441

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