[gmx-users] visualize gromacs trajectory in VMD

[Justin Lemkul]

On 4/2/14, 12:22 AM, pravin wrote:
> Hi,
>
>   This happens due to pbc. You can use trajorder to get right structure.
>

trjconv, not trjorder.  The latter performs a very different function.

-Justin

-- 
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

==================================================