[gmx-users] Conserved energy decreases linearly
David van der Spoel
spoel at xray.bmc.uu.se
Thu Apr 3 15:27:40 CEST 2014
Hi,
I'm doing NVT simulations of pure liquids with a Nose-Hoover thermostat and
ref-t: 298.15
tau-t: 0.2
cutoff-scheme = Group
ns_type = Grid
nstlist = 5
coulombtype = PME
coulomb-modifier = None
rcoulomb-switch = 0
rcoulomb = 1.1
vdwtype = Cut-off
vdw-modifier = None
rvdw-switch = 0
rvdw = 1.1
the conserved energy drops by 8 kJ/mol/ns (0.23 kJ/mol/ns/dof).
No constraints are used.
Is this normal or too large a drop in conserved energy?
Any tips to update the protocol?
--
David van der Spoel, Ph.D., Professor of Biology
Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone: +46184714205.
spoel at xray.bmc.uu.se http://folding.bmc.uu.se
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