[gmx-users] Number of contacts matrix

[Raphael]

Hi,

could any body help me to plot a N x N matrix (N = number of residues)? But
instead of getting a mean distance matrix (with g_mdmat) for all residues
during a trajectory, I would like to plot a matrix for the number of
contacts (z-axis) within a defined cutoff made by all pairs of residues
(CA).

I was looking for an easy way to do this but I couldn't find it.

Thanks for any help

Raphael

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