[gmx-users] Limiting amount of data Gromacs prints out

Mark Abraham mark.j.abraham at gmail.com
Sun Aug 10 02:58:12 CEST 2014

On Sat, Aug 9, 2014 at 5:05 PM, Jackson Chief Elk <jchiefelk at gmail.com>

> Hi,
> Gromacs is printing out WAYY more data then there is available on my small
> cluster at UCSC.  I just need position data from each simulation time step
> for the analysis I want to perform.  Is there a way that does not involve
> hacking the source code to set mdrun to print out ONLY the *.xtc file?

mdrun is writing what you planned for it to print with your .mdp file. :-)


> Cheers,
> Jackson
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