August 2014 Archives by subject
Starting: Fri Aug 1 03:15:28 CEST 2014
Ending: Sun Aug 31 23:15:01 CEST 2014
Messages: 798
- [gmx-users] (no subject)
Balasubramanian Suriyanarayanan
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
vidhya sankar
- [gmx-users] (no subject)
Balasubramanian Suriyanarayanan
- [gmx-users] (no subject)
Tsjerk Wassenaar
- [gmx-users] (no subject)
Balasubramanian Suriyanarayanan
- [gmx-users] [gmx-developers] About dynamics loading balance
Roland Schulz
- [gmx-users] [gmx-developers] About dynamics loading balance
Roland Schulz
- [gmx-users] [gmx-developers] About dynamics loading balance
Yunlong Liu
- [gmx-users] [gmx-developers] About dynamics loading balance
Szilárd Páll
- [gmx-users] [gmx-developers] About dynamics loading balance
Yunlong Liu
- [gmx-users] [gmx-developers] About dynamics loading balance
Mark Abraham
- [gmx-users] a gromacs feature to do TMD like simulation
mahboobe sadr
- [gmx-users] A simple em.mdp and md.mdp file for GMX 5.0
Alan
- [gmx-users] A simple em.mdp and md.mdp file for GMX 5.0
Mark Abraham
- [gmx-users] A simple em.mdp and md.mdp file for GMX 5.0
Alan
- [gmx-users] Adding metal ions near graphene sheet
#SUKRITI GUPTA#
- [gmx-users] Adding metal ions near graphene sheet
Justin Lemkul
- [gmx-users] Additional repulsive terms for LJ
Timothy Click
- [gmx-users] Additional repulsive terms for LJ
Justin Lemkul
- [gmx-users] Additional repulsive terms for LJ
Timothy Click
- [gmx-users] Additional repulsive terms for LJ
Justin Lemkul
- [gmx-users] Additional repulsive terms for LJ
Dr. Timothy Click
- [gmx-users] Additional repulsive terms for LJ
Justin Lemkul
- [gmx-users] analyze diffusion of water in first hydration shell
pratibha kapoor
- [gmx-users] analyze diffusion of water in first hydration shell
Tsjerk Wassenaar
- [gmx-users] analyze water in the hydration shell
pratibha kapoor
- [gmx-users] analyze water in the hydration shell
Tsjerk Wassenaar
- [gmx-users] Any way to use GROMACS 4.6.x and 5 together
Bin Liu
- [gmx-users] Any way to use GROMACS 4.6.x and 5 together
Justin Lemkul
- [gmx-users] Any way to use GROMACS 4.6.x and 5 together
massimo sandal
- [gmx-users] Any way to use GROMACS 4.6.x and 5 together
Tamas Karpati
- [gmx-users] Any way to use GROMACS 4.6.x and 5 together
Mark Abraham
- [gmx-users] Any way to use GROMACS 4.6.x and 5 together
Tamas Karpati
- [gmx-users] Any way to use GROMACS 4.6.x and 5 together
Bin Liu
- [gmx-users] Archaeal lipid packages for CHARMM36
Wainwright, Josh
- [gmx-users] Archaeal lipid packages for CHARMM36
Justin Lemkul
- [gmx-users] Archaeal lipid packages for CHARMM36
Wainwright, Josh
- [gmx-users] Archaeal lipid packages for CHARMM36
Justin Lemkul
- [gmx-users] Archaeal lipid packages for CHARMM36
Wainwright, Josh
- [gmx-users] Archaeal lipid packages for CHARMM36
Justin Lemkul
- [gmx-users] Archaeal lipid packages for Gromos 53A6
Wainwright, Josh
- [gmx-users] Archaeal lipid packages for Gromos 53A6
Justin Lemkul
- [gmx-users] Archaeal lipid packages for Gromos 53A6
Justin Lemkul
- [gmx-users] Archaeal lipid packages for Gromos 53A6
Wainwright, Josh
- [gmx-users] Archaeal lipid packages for Gromos 53A6
XAvier Periole
- [gmx-users] Are there some environment variables not valid anymore?
Justin Lemkul
- [gmx-users] Are there some environment variables not valid anymore?
Justin Lemkul
- [gmx-users] Are there some environment variables not valid anymore?
Theodore Si
- [gmx-users] Atomic Clashes during Energy minimization
neha bharti
- [gmx-users] Atomic Clashes during Energy minimization
Justin Lemkul
- [gmx-users] atoms are not part of any of the T-Coupling groups
Nidhi Katyal
- [gmx-users] atoms are not part of any of the T-Coupling groups
Justin Lemkul
- [gmx-users] atoms are not part of any of the T-Coupling groups
Nidhi Katyal
- [gmx-users] atoms are not part of any of the T-Coupling groups
Justin Lemkul
- [gmx-users] AVX vs AVX2
Pappu Kumar
- [gmx-users] AVX vs AVX2
Szilárd Páll
- [gmx-users] AVX vs AVX2
Szilárd Páll
- [gmx-users] AVX vs AVX2
Bin Liu
- [gmx-users] build membrane system from Charmm-Gui
Xiang Ning
- [gmx-users] build membrane system from Charmm-Gui
Justin Lemkul
- [gmx-users] build membrane system from Charmm-Gui
Xiang Ning
- [gmx-users] build membrane system from Charmm-Gui
Justin Lemkul
- [gmx-users] build membrane system from Charmm-Gui
Xiang Ning
- [gmx-users] build membrane system from Charmm-Gui
Xiang Ning
- [gmx-users] build membrane system from Charmm-Gui
Justin Lemkul
- [gmx-users] Calculate mean length of a bond.
Dawid das
- [gmx-users] Calculate mean length of a bond.
Justin Lemkul
- [gmx-users] Calculate RMSD for specific residue.
Dawid das
- [gmx-users] Calculate RMSD for specific residue.
Justin Lemkul
- [gmx-users] Calculate RMSD for specific residue.
Dawid das
- [gmx-users] Calculate RMSD for specific residue.
Justin Lemkul
- [gmx-users] Calculate RMSD for specific residue.
Dawid das
- [gmx-users] Calculate RMSD for specific residue.
Justin Lemkul
- [gmx-users] calculate the ∆SASA for free energy calculation
Mahboobeh Eslami
- [gmx-users] calculate the ∆SASA for free energy calculation
Justin Lemkul
- [gmx-users] calculate the ∆SASA for free energy calculation
Mahboobeh Eslami
- [gmx-users] calculate the ∆SASA for free energy calculation
Justin Lemkul
- [gmx-users] calculate the ∆SASA for free energy calculation
Mahboobeh Eslami
- [gmx-users] calculate the ∆SASA for free energy calculation
Justin Lemkul
- [gmx-users] Can I delete trr file?
Batdorj Batsaikhan
- [gmx-users] Can I delete trr file?
Justin Lemkul
- [gmx-users] Can I delete trr file?
Batdorj Batsaikhan
- [gmx-users] Can I delete trr file?
DASARI NAGARAJ
- [gmx-users] Can I delete trr file?
Mark Abraham
- [gmx-users] Can I expect numerical reproducibility between Gromacs 4.6 and Gromacs 5
ms
- [gmx-users] Can I expect numerical reproducibility between Gromacs 4.6 and Gromacs 5
Mark Abraham
- [gmx-users] Can I make Free Energy Calculations for Protein and Water System?
Batdorj Batsaikhan
- [gmx-users] Can I make Free Energy Calculations for Protein and Water System?
Justin Lemkul
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Theodore Si
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Mark Abraham
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Mark Abraham
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Carsten Kutzner
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Mark Abraham
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Szilárd Páll
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Mark Abraham
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Mark Abraham
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Mark Abraham
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Szilárd Páll
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Xingcheng Lin
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Szilárd Páll
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Szilárd Páll
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Szilárd Páll
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Theodore Si
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Theodore Si
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Theodore Si
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Theodore Si
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Theodore Si
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Theodore Si
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Theodore Si
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Theodore Si
- [gmx-users] Can we set the number of pure PME nodes when using GPU&CPU?
Theodore Si
- [gmx-users] can we use AMBER12 FF?
Albert
- [gmx-users] can we use AMBER12 FF?
Mark Abraham
- [gmx-users] can we use Area per lipid: 1.00 nm^2
neha bharti
- [gmx-users] can we use Area per lipid: 1.00 nm^2
Justin Lemkul
- [gmx-users] Cannot find "gmx_mpi" when installing gromacs 5.0
朱文鹏
- [gmx-users] Cannot find "gmx_mpi" when installing gromacs 5.0
Mark Abraham
- [gmx-users] Cannot find "gmx_mpi" when installing gromacs 5.0
朱文鹏
- [gmx-users] centering with trjconv
Eric Smoll
- [gmx-users] centering with trjconv
Justin Lemkul
- [gmx-users] centering with trjconv
Tsjerk Wassenaar
- [gmx-users] centering with trjconv
Eric Smoll
- [gmx-users] centering with trjconv
lloyd riggs
- [gmx-users] centering with trjconv
Tsjerk Wassenaar
- [gmx-users] charged & uncharged ligand
shahab shariati
- [gmx-users] charged & uncharged ligand
Justin Lemkul
- [gmx-users] Charmm to gromacs
Abu Naser
- [gmx-users] Charmm to gromacs
Justin Lemkul
- [gmx-users] Charmm to gromacs
Abu Naser
- [gmx-users] Charmm to gromacs
Justin Lemkul
- [gmx-users] Charmm to gromacs
Abu Naser
- [gmx-users] Charmm to gromacs
Justin Lemkul
- [gmx-users] Charmm to gromacs
Abu Naser
- [gmx-users] CHARMM36 sucrose?
Smith, Micholas D.
- [gmx-users] CHARMM36 sucrose?
Justin Lemkul
- [gmx-users] CHARMM36 sucrose?
Smith, Micholas D.
- [gmx-users] CHARMM36 sucrose?
Justin Lemkul
- [gmx-users] CHARMM36 sucrose?
Smith, Micholas D.
- [gmx-users] CHARMM36 sucrose?
Justin Lemkul
- [gmx-users] CHARMM36 sucrose?
Smith, Micholas D.
- [gmx-users] Cluster size and aggregation number calculation
Praveen Kumar
- [gmx-users] Cluster size and aggregation number calculation
Justin Lemkul
- [gmx-users] Command not found after typing g_luck
Kester Wong
- [gmx-users] Command not found after typing g_luck
Mark Abraham
- [gmx-users] concatenate NAMD trajectories
Natal Kanaan
- [gmx-users] concatenate NAMD trajectories
Justin Lemkul
- [gmx-users] concatenate NAMD trajectories
Natal Kanaan
- [gmx-users] concatenate NAMD trajectories
Justin Lemkul
- [gmx-users] concatenate NAMD trajectories
Natal Kanaan
- [gmx-users] constrain pulling
Lalita Shaki
- [gmx-users] constrain pulling
Carsten Kutzner
- [gmx-users] convergence of MD simulations,
Ali Alizadeh
- [gmx-users] convergence of MD simulations,
Justin Lemkul
- [gmx-users] convergence of MD simulations,
Ali Alizadeh
- [gmx-users] Coordinate file for charmm36 POPC
yashita thakur
- [gmx-users] Coordinate file for charmm36 POPC
Ariel Leong
- [gmx-users] Coordinate file for charmm36 POPC
yashita thakur
- [gmx-users] Coordinate file for charmm36 POPC
Justin Lemkul
- [gmx-users] Coordinate file for charmm36 POPC
yashita thakur
- [gmx-users] Coordinate file for charmm36 POPC
Justin Lemkul
- [gmx-users] coordinates don't match
Lovika Moudgil
- [gmx-users] coordinates don't match
Lalita Shaki
- [gmx-users] coordinates don't match
RINU KHATTRI
- [gmx-users] coordinates don't match
Justin Lemkul
- [gmx-users] coordinates don't match
Lovika Moudgil
- [gmx-users] coordinates don't match
Lovika Moudgil
- [gmx-users] Counting Interactions in vacuo ..
Alberto Sergio Garay
- [gmx-users] CUDA5.5 and ICC 14
Theodore Si
- [gmx-users] CUDA5.5 and ICC 14
Mark Abraham
- [gmx-users] CUDA5.5 and ICC 14
Theodore Si
- [gmx-users] delete molecule with command line?
Albert
- [gmx-users] delete molecule with command line?
Justin Lemkul
- [gmx-users] Dihedral Restrain Syntax 4.6
Johnny Lu
- [gmx-users] Dihedral Restrain Syntax 4.6
Justin Lemkul
- [gmx-users] Dihedral Restrain Syntax 4.6
Johnny Lu
- [gmx-users] Dihedral Restrain Syntax 4.6
Johnny Lu
- [gmx-users] Dihedral Restrain Syntax 4.6
Justin Lemkul
- [gmx-users] Dihedral Restrain Syntax 4.6
Johnny Lu
- [gmx-users] Dihedral Restrain Syntax 4.6
Justin Lemkul
- [gmx-users] Dipole calculation for one residue.
Dawid das
- [gmx-users] Dipole calculation for one residue.
Justin Lemkul
- [gmx-users] do_dssp result over written on the one line
Batdorj Batsaikhan
- [gmx-users] do_dssp result over written on the one line
Justin Lemkul
- [gmx-users] do_dssp result over written on the one line
Batdorj Batsaikhan
- [gmx-users] do_dssp result over written on the one line
Justin Lemkul
- [gmx-users] DSSP
Nikolaos Michelarakis
- [gmx-users] DSSP
bipin singh
- [gmx-users] DSSP
Nikolaos Michelarakis
- [gmx-users] DSSP
bipin singh
- [gmx-users] DSSP
Mark Abraham
- [gmx-users] DSSP
rama david
- [gmx-users] DSSP
Nikolaos Michelarakis
- [gmx-users] DSSP
Mark Abraham
- [gmx-users] DSSP
Nikolaos Michelarakis
- [gmx-users] DSSP
bipin singh
- [gmx-users] dssp_index file
Ahmet yıldırım
- [gmx-users] dssp_index file
Justin Lemkul
- [gmx-users] dssp_index file
Ahmet Yıldırım
- [gmx-users] dssp_index file
Justin Lemkul
- [gmx-users] dssp_index file
Ahmet Yıldırım
- [gmx-users] dssp_index file
Justin Lemkul
- [gmx-users] dssp_index file
Ahmet Yıldırım
- [gmx-users] Eigenvalues not saved from gmx covar in GROMACS 5
Steven Morgan
- [gmx-users] Eigenvalues not saved from gmx covar in GROMACS 5
Justin Lemkul
- [gmx-users] Eigenvalues not saved from gmx covar in GROMACS 5
Tsjerk Wassenaar
- [gmx-users] Elastic Network Model
shivangi nangia
- [gmx-users] Elastic Network Model
Tsjerk Wassenaar
- [gmx-users] Energy drift
Xiaobin Cao
- [gmx-users] Energy drift
David van der Spoel
- [gmx-users] Energy drift
Xiaobin Cao
- [gmx-users] Energy drift
Mark Abraham
- [gmx-users] Energy drift
Xiaobin Cao
- [gmx-users] Energy drift
Mark Abraham
- [gmx-users] Energy drift
Xiaobin Cao
- [gmx-users] Energy drift
Mark Abraham
- [gmx-users] Energy drift
Mark Abraham
- [gmx-users] Energy drift
Xiaobin Cao
- [gmx-users] Energy drift
Mark Abraham
- [gmx-users] Energy drift
Xiaobin Cao
- [gmx-users] Energy drift
Mark Abraham
- [gmx-users] Energy drift
Xiaobin Cao
- [gmx-users] Energy file ener.edr not recognized, maybe different CPU?
Kester Wong
- [gmx-users] Energy file ener.edr not recognized, maybe different CPU?
Justin Lemkul
- [gmx-users] Energy file ener.edr not recognized, maybe different CPU?
Kester Wong
- [gmx-users] Energy file ener.edr not recognized, maybe different CPU?
Justin Lemkul
- [gmx-users] Energy file ener.edr not recognized, maybe different CPU?
Kester Wong
- [gmx-users] Energy file ener.edr not recognized, maybe different CPU?
Kester Wong
- [gmx-users] error about g_bar
Swapnil Kate
- [gmx-users] error about g_bar
Justin Lemkul
- [gmx-users] error about g_bar
Justin Lemkul
- [gmx-users] error about g_bar
Swapnil Kate
- [gmx-users] error about g_bar
Justin Lemkul
- [gmx-users] error about g_bar
Justin Lemkul
- [gmx-users] Error during Energy minimization
Deepak Ojha
- [gmx-users] Error during Energy minimization
Justin Lemkul
- [gmx-users] Error in inflategro.pl
neha bharti
- [gmx-users] Error in inflategro.pl
Justin Lemkul
- [gmx-users] Error in Ligand position restraints
neha bharti
- [gmx-users] Error in Ligand position restraints
Justin Lemkul
- [gmx-users] Error in methanol simulation
Deepak Ojha
- [gmx-users] Error in methanol simulation
Justin Lemkul
- [gmx-users] Error in methanol simulation
Dr. Vitaly Chaban
- [gmx-users] Error in system_inflate.gro coordinates does not match
RINU KHATTRI
- [gmx-users] Error in system_inflate.gro coordinates does not match
RINU KHATTRI
- [gmx-users] Error occurs when compiling gromacs using vtcc
Theodore Si
- [gmx-users] Error using pdb2gmx tool
ankit agrawal
- [gmx-users] Error using pdb2gmx tool
Justin Lemkul
- [gmx-users] error when trying to continue a simulation
Sudharsan Sridharan
- [gmx-users] error when trying to continue a simulation
Mark Abraham
- [gmx-users] Error while running InflateGRO File
neha bharti
- [gmx-users] Error while running InflateGRO File
Justin Lemkul
- [gmx-users] error with genion
shahab shariati
- [gmx-users] error with genion
Dallas Warren
- [gmx-users] error with genion
Tsjerk Wassenaar
- [gmx-users] Error with tabulated potential and tip4p water model
Udaya Dahal
- [gmx-users] Error with tabulated potential and tip4p water model
Mark Abraham
- [gmx-users] Error with tabulated potential and tip4p water model
Udaya Dahal
- [gmx-users] Error with tabulated potential and tip4p water model
Mark Abraham
- [gmx-users] Error with tabulated potential and tip4p water model
Udaya Dahal
- [gmx-users] Extending simulation problem.
Dawid das
- [gmx-users] Extending simulation problem.
Dawid das
- [gmx-users] Extending simulation problem.
Justin Lemkul
- [gmx-users] Extending simulation problem.
Dawid das
- [gmx-users] Extending simulation problem.
Mark Abraham
- [gmx-users] Extending simulation problem.
Dawid das
- [gmx-users] Extending simulation problem.
Dawid das
- [gmx-users] Extending simulation problem.
Justin Lemkul
- [gmx-users] Extending simulation problem.
Mark Abraham
- [gmx-users] FMM in GMX
Smart Eagle
- [gmx-users] Forcefield parameters for Zinc and phosphorylated residues
Michael Carter
- [gmx-users] Forcefield parameters for Zinc and phosphorylated residues
bipin singh
- [gmx-users] Forcefield parameters for Zinc and phosphorylated residues
Michael Carter
- [gmx-users] Forcefield parameters for Zinc and phosphorylated residues
Piggot T.
- [gmx-users] Forcefield parameters for Zinc and phosphorylated residues
Michael Carter
- [gmx-users] Forcefield parameters for Zinc and phosphorylated residues
Piggot T.
- [gmx-users] Fwd: k.sunny wants to share a link | Gromacs
sunny rajapal
- [gmx-users] g_cluster and loops dynamics
James Starlight
- [gmx-users] g_dielectric error
Cyrus Djahedi
- [gmx-users] g_dielectric error
Justin Lemkul
- [gmx-users] g_gyrate output columns meaning
Dawid das
- [gmx-users] g_gyrate output columns meaning
Justin Lemkul
- [gmx-users] g_membed error - Trying to remove more lipid molecules than there are in the membrane
Carlos Navarrro Retamal
- [gmx-users] g_membed error - Trying to remove more lipid molecules than there are in the membrane
Carlos Navarrro Retamal
- [gmx-users] g_mindist works along trajectory? (gromacs 4.6)
ms
- [gmx-users] g_mindist works along trajectory? (gromacs 4.6)
Justin Lemkul
- [gmx-users] g_mindist works along trajectory? (gromacs 4.6)
ms
- [gmx-users] g_sas
Eric Smoll
- [gmx-users] g_sas
rajat desikan
- [gmx-users] g_sas
rajat desikan
- [gmx-users] g_sas
Eric Smoll
- [gmx-users] g_sas
Justin Lemkul
- [gmx-users] g_sas
rajat desikan
- [gmx-users] g_sas
Eric Smoll
- [gmx-users] g_sas
Justin Lemkul
- [gmx-users] g_sas
João M. Damas
- [gmx-users] g_sas area
xy21hb
- [gmx-users] g_sas area
Eric Smoll
- [gmx-users] g_sas dG
xy21hb
- [gmx-users] g_sas dG
David van der Spoel
- [gmx-users] g_select position variables
Cara Kreck
- [gmx-users] g_select syntax
Bin Liu
- [gmx-users] g_select syntax
Teemu Murtola
- [gmx-users] g_tcaf error message
Andy Chao
- [gmx-users] g_tcaf error message
Justin Lemkul
- [gmx-users] g_wham cycl or periodic
ANDRES ADOLFO ORTEGA GUERRERO
- [gmx-users] g_wham cycl or periodic
Justin Lemkul
- [gmx-users] GB parameters for DNA
Jianguo Li
- [gmx-users] GBSA + infinite cutoff + GPU in GMX5?
Sandeep Somani
- [gmx-users] GBSA + infinite cutoff + GPU in GMX5?
Justin Lemkul
- [gmx-users] GBSA + infinite cutoff + GPU in GMX5?
Sandeep Somani
- [gmx-users] glucosidic angles
Cyrus Djahedi
- [gmx-users] glucosidic angles
Justin Lemkul
- [gmx-users] gmx 4.6.6: rvdw == rcoulomb for Verlet lists
David Dotson
- [gmx-users] gmx 4.6.6: rvdw == rcoulomb for Verlet lists
Justin Lemkul
- [gmx-users] gmx 4.6.6: rvdw == rcoulomb for Verlet lists
David Dotson
- [gmx-users] GPU Acceleration in case of Implicit Solvent Simulations
Mark Abraham
- [gmx-users] GPU Acceleration in case of Implicit Solvent Simulations
Siva Dasetty
- [gmx-users] GPU and MPI
Da-Wei Li
- [gmx-users] GPU and MPI
Carsten Kutzner
- [gmx-users] GPU and MPI
Da-Wei Li
- [gmx-users] GPU and MPI
Carsten Kutzner
- [gmx-users] GPU recommendations
Keith Callenberg
- [gmx-users] GPU recommendations
Szilárd Páll
- [gmx-users] GPU recommendations
Keith Callenberg
- [gmx-users] GPU vs Processor load
Pappu Kumar
- [gmx-users] Graphene topology file
#SUKRITI GUPTA#
- [gmx-users] Graphene topology file
Justin Lemkul
- [gmx-users] Graphene topology file
Justin Lemkul
- [gmx-users] Graphene topology file
Justin Lemkul
- [gmx-users] Graphene topology file
Justin Lemkul
- [gmx-users] gromacs
Meenakshi Rajput
- [gmx-users] gromacs
rajat desikan
- [gmx-users] Gromacs 4.6.7 released
Mark Abraham
- [gmx-users] Gromacs 5.0 installation
Fatemeh Dabbagh
- [gmx-users] Gromacs 5.0 installation
Dan Sponseller
- [gmx-users] Gromacs feature and usage survey
Mark Abraham
- [gmx-users] Gromacs feature and usage survey
MUSYOKA THOMMAS
- [gmx-users] Gromacs feature and usage survey
Mark Abraham
- [gmx-users] Gromacs feature and usage survey
MUSYOKA THOMMAS
- [gmx-users] Gromacs feature and usage survey
Mark Abraham
- [gmx-users] Gromacs feature and usage survey
Michael Shirts
- [gmx-users] Gromacs feature and usage survey
MUSYOKA THOMMAS
- [gmx-users] Gromacs help
Tuhin Samanta
- [gmx-users] Gromacs help
Tsjerk Wassenaar
- [gmx-users] Gromacs help
Tuhin Samanta
- [gmx-users] GROMACS version 5.0 incompatible with my hardware - help req
Agnivo Gosai
- [gmx-users] GROMACS version 5.0 incompatible with my hardware - help req
Johnny Lu
- [gmx-users] GROMACS version 5.0 incompatible with my hardware - help req
Johnny Lu
- [gmx-users] GROMACS version 5.0 incompatible with my hardware - help req
Justin Lemkul
- [gmx-users] Gromacs-4.6.6 + openmpi 1.6: no output running in 2 nodes
Elton Carvalho
- [gmx-users] Gromacs-4.6.6 + openmpi 1.6: no output running in 2 nodes
Mark Abraham
- [gmx-users] Gromacs-4.6.6 + openmpi 1.6: no output running in 2 nodes
Elton Carvalho
- [gmx-users] gromacs.org_gmx-users Digest, Vol 123, Issue 139
Cyrus Djahedi
- [gmx-users] gromacs.org_gmx-users Digest, Vol 124, Issue 40
Agnivo Gosai
- [gmx-users] gromacs.org_gmx-users Digest, Vol 124, Issue 45
Pepe Sapam
- [gmx-users] gromacs.org_gmx-users Digest, Vol 124, Issue 55
Wainwright, Josh
- [gmx-users] gromacs.org_gmx-users Digest, Vol 124, Issue 58
Nikolaos Michelarakis
- [gmx-users] hints for core/shell optimization?
Justin Lemkul
- [gmx-users] hints for core/shell optimization?
Tamas Karpati
- [gmx-users] hints for core/shell optimization?
Justin Lemkul
- [gmx-users] hints for core/shell optimization? (Tamas Karpati)
Mikhail Stukan
- [gmx-users] How do you print positions in double precision
Jackson Chief Elk
- [gmx-users] How do you print positions in double precision
Carsten Kutzner
- [gmx-users] How invoke hamiltonian replica exchange in 4.6.3
jia jia
- [gmx-users] How invoke hamiltonian replica exchange in 4.6.5
jia jia
- [gmx-users] How invoke hamiltonian replica exchange in 4.6.5
Mark Abraham
- [gmx-users] How to combine Slipid FF with amber FF?
Yorquant Wang
- [gmx-users] How to combine Slipid FF with amber FF?
rajat desikan
- [gmx-users] How to combine Slipid FF with amber FF?
Yorquant Wang
- [gmx-users] How to combine Slipid FF with amber FF?
Justin Lemkul
- [gmx-users] How to combine Slipid FF with amber FF?
Justin Lemkul
- [gmx-users] How to combine Slipid FF with amber FF?
Justin Lemkul
- [gmx-users] How to combine Slipid FF with amber FF?
rajat desikan
- [gmx-users] How to modify the rtp file for graphene?
Andy Chao
- [gmx-users] How to modify the rtp file for graphene?
Justin Lemkul
- [gmx-users] How to profile GMX?
Theodore Si
- [gmx-users] how to pull along Z direction
Lalita Shaki
- [gmx-users] how to pull along Z direction?
Albert
- [gmx-users] how to record log file?
Albert
- [gmx-users] how to record log file?
Kester Wong
- [gmx-users] how to record log file?
Albert
- [gmx-users] How to setup my PBS script?
Kester Wong
- [gmx-users] How to use Gromacs toolkit to analyse streaming velocity profile in NEMD
Junfang.Zhang at csiro.au
- [gmx-users] how to write in a script?
Albert
- [gmx-users] how to write in a script?
Chandan Choudhury
- [gmx-users] how to write in a script?
Albert
- [gmx-users] how to write in a script?
João Henriques
- [gmx-users] how to write in a script?
Albert
- [gmx-users] how to write in a script?
Maurício Menegatti Rigo
- [gmx-users] how to write in a script?
João Henriques
- [gmx-users] hydrogen bond correlation function
xy21hb
- [gmx-users] Hydrogen bonds between new residue and protein.
Dawid das
- [gmx-users] Hydrogen bonds between new residue and protein.
Dawid das
- [gmx-users] Hydrogen bonds between new residue and protein.
Justin Lemkul
- [gmx-users] Increase the box size or decrease rlist
pragna lakshmi
- [gmx-users] Increase the box size or decrease rlist
Justin Lemkul
- [gmx-users] Increase the box size or decrease rlist
pragna lakshmi
- [gmx-users] Increase the box size or decrease rlist
pragna lakshmi
- [gmx-users] Increase the box size or decrease rlist
Mark Abraham
- [gmx-users] Increase the box size or decrease rlist
pragna lakshmi
- [gmx-users] Increase the box size or decrease rlist
Justin Lemkul
- [gmx-users] index file for g_velacc to calculate diffusion coefficient in the bulk
Abbasi, N.
- [gmx-users] Install errors
Valentina Loconte
- [gmx-users] Install errors
Mark Abraham
- [gmx-users] Install errors
Valentina Loconte
- [gmx-users] Interpreting flooding results
Ricardo O. S. Soares
- [gmx-users] interpreting g_hydorder results
pratibha kapoor
- [gmx-users] interpreting g_hydorder results
pratibha kapoor
- [gmx-users] interrupt simulation
Negar Parvizi
- [gmx-users] interrupt simulation
Justin Lemkul
- [gmx-users] Interteting flooding results
Ricardo O. S. Soares
- [gmx-users] Interteting flooding results
Carsten Kutzner
- [gmx-users] Interuption Simulation
Negar Parvizi
- [gmx-users] Interuption Simulation
Negar Parvizi
- [gmx-users] Interuption Simulation
Negar Parvizi
- [gmx-users] Interuption Simulation
Justin Lemkul
- [gmx-users] Iron containing structure simulation crash
Nikolaos Michelarakis
- [gmx-users] Iron containing structure simulation crash
Justin Lemkul
- [gmx-users] Iron containing structure simulation crash
Nikolaos Michelarakis
- [gmx-users] Iron containing structure simulation crash
Nikolaos Michelarakis
- [gmx-users] Iron containing structure simulation crash
Justin Lemkul
- [gmx-users] Iron containing structure simulation crash
Justin Lemkul
- [gmx-users] Job Submission script for Multiple nodes GPUs
Xingcheng Lin
- [gmx-users] Job Submission script for Multiple nodes GPUs
Carsten Kutzner
- [gmx-users] Job Submission script for Multiple nodes GPUs calculation
Xingcheng Lin
- [gmx-users] Job Submission script for Multiple nodes GPUs calculation
Carsten Kutzner
- [gmx-users] Layerwise protein-water HB Correlation
xy21hb
- [gmx-users] Layerwise protein-water HB Correlation
xy21hb
- [gmx-users] Lennard jones and bonded opls aa parameters for sulfate ions
#SUKRITI GUPTA#
- [gmx-users] Licam Fe parameters
Nikolaos Michelarakis
- [gmx-users] ligand binding
Meenakshi Rajput
- [gmx-users] ligand binding
Justin Lemkul
- [gmx-users] ligand binding
Meenakshi Rajput
- [gmx-users] ligand binding
Justin Lemkul
- [gmx-users] ligand is out side the box
RINU KHATTRI
- [gmx-users] ligand is out side the box
Tsjerk Wassenaar
- [gmx-users] Limiting amount of data Gromacs prints out
Jackson Chief Elk
- [gmx-users] Limiting amount of data Gromacs prints out
Mark Abraham
- [gmx-users] linking lipid covalently to protein...
Ozbil, Mehmet
- [gmx-users] linking lipid covalently to protein...
Dr. Vitaly Chaban
- [gmx-users] Lysozyme-Water Tutorial problem : em.tpr
Agnivo Gosai
- [gmx-users] Lysozyme-Water Tutorial problem : em.tpr
Justin Lemkul
- [gmx-users] Martini force field for inhibitors
Sridhar Kumar Kannam
- [gmx-users] Martini force field for inhibitors
XAvier Periole
- [gmx-users] martinize.py
shivangi nangia
- [gmx-users] martinize.py
Tsjerk Wassenaar
- [gmx-users] martinize.py
Tsjerk Wassenaar
- [gmx-users] martinize.py
shivangi nangia
- [gmx-users] MD exit condition
Eric Smoll
- [gmx-users] MD exit condition
Mark Abraham
- [gmx-users] md simulation steps
Meenakshi Rajput
- [gmx-users] md simulation steps
Mark Abraham
- [gmx-users] md simulation steps
Meenakshi Rajput
- [gmx-users] mdrun error
Lovika Moudgil
- [gmx-users] mdrun error
Justin Lemkul
- [gmx-users] mdrun error
Kester Wong
- [gmx-users] mdrun error
Lovika Moudgil
- [gmx-users] mdrun error
Mark Abraham
- [gmx-users] mdrun error
Kester Wong
- [gmx-users] mdrun error
Lovika Moudgil
- [gmx-users] mdrun error
Mark Abraham
- [gmx-users] Measuring distances between residues and visualising the results
Nikolaos Michelarakis
- [gmx-users] Measuring distances between residues and visualising the results
Justin Lemkul
- [gmx-users] Membrane simulations
lloyd riggs
- [gmx-users] Membrane simulations
Victor Rosas Garcia
- [gmx-users] Membrane simulations
lloyd riggs
- [gmx-users] Membrane simulations
Björn Sommer
- [gmx-users] Missing Residues of PDB file
neha bharti
- [gmx-users] Missing Residues of PDB file
RINU KHATTRI
- [gmx-users] Missing Residues of PDB file
rama david
- [gmx-users] Missing Residues of PDB file
neha bharti
- [gmx-users] Missing Residues of PDB file
rama david
- [gmx-users] Missing Residues of PDB file
Justin Lemkul
- [gmx-users] Missing Residues of PDB file
RINU KHATTRI
- [gmx-users] Missing Residues of PDB file
Justin Lemkul
- [gmx-users] Missing Residues of PDB file (rama david)
neha bharti
- [gmx-users] Monitor distance between atoms
Eric Smoll
- [gmx-users] Monitor distance between atoms
Justin Lemkul
- [gmx-users] Most appropriate structure to compare to in g_rms
Natalie Stephenson
- [gmx-users] Most appropriate structure to compare to in g_rms
Natalie Stephenson
- [gmx-users] Most appropriate structure to compare to in g_rms
Justin Lemkul
- [gmx-users] Most appropriate structure to compare to in g_rms
Natalie Stephenson
- [gmx-users] Most appropriate structure to compare to in g_rms
Justin Lemkul
- [gmx-users] Most appropriate structure to compare to in g_rms
Tsjerk Wassenaar
- [gmx-users] Multiple parameter entries in itp with the same name
Andrew DeYoung
- [gmx-users] Multiple parameter entries in itp with the same name
Justin Lemkul
- [gmx-users] Multiple parameter entries in itp with the same name
Mark Abraham
- [gmx-users] new analysis in gromacs
Atila Petrosian
- [gmx-users] new analysis in gromacs
Justin Lemkul
- [gmx-users] new analysis in gromacs
Atila Petrosian
- [gmx-users] new analysis in gromacs
Atila Petrosian
- [gmx-users] new analysis in gromacs
Mark Abraham
- [gmx-users] new analysis in gromacs
Atila Petrosian
- [gmx-users] new analysis in gromacs
Mark Abraham
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] New residue in FF does not bond to others.
Justin Lemkul
- [gmx-users] New residue in FF does not bond to others.
Justin Lemkul
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] New residue in FF does not bond to others.
Justin Lemkul
- [gmx-users] New residue in FF does not bond to others.
Justin Lemkul
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] New residue in FF does not bond to others.
Justin Lemkul
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] New residue in FF does not bond to others.
Justin Lemkul
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] New residue in FF does not bond to others.
Justin Lemkul
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] New residue in FF does not bond to others.
Justin Lemkul
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] New residue in FF does not bond to others.
Justin Lemkul
- [gmx-users] New residue in FF does not bond to others.
Dawid das
- [gmx-users] Normalization In RDF, GROMACS
Haiyang Zhao
- [gmx-users] Nose-Hoover + Parrinello Rahman reduces density of liquid phase as compared to Berendsen thermostat + barostat
Yip Yew Mun
- [gmx-users] Nose-Hoover + Parrinello Rahman reduces density of liquid phase as compared to Berendsen thermostat + barostat
Mark Abraham
- [gmx-users] Numerical Stability of Gromacs Implementation
Johnny Lu
- [gmx-users] Numerical Stability of Gromacs Implementation
Justin Lemkul
- [gmx-users] Numerical Stability of Gromacs Implementation
Mark Abraham
- [gmx-users] Numerical Stability of Gromacs Implementation
Johnny Lu
- [gmx-users] Numerical Stability of Gromacs Implementation
Mark Abraham
- [gmx-users] Numerical Stability of Gromacs Implementation
Johnny Lu
- [gmx-users] Numerical Stability of Gromacs Implementation
Mark Abraham
- [gmx-users] Numerical Stability of Gromacs Implementation
Christoph Junghans
- [gmx-users] NVE Temperature Drift
Johnny Lu
- [gmx-users] NVE Temperature Drift
Mark Abraham
- [gmx-users] NVE Temperature Drift
Johnny Lu
- [gmx-users] NVE Temperature Drift
Justin Lemkul
- [gmx-users] NVE Temperature Drift
Johnny Lu
- [gmx-users] nvt error
Prajisha Sujaya
- [gmx-users] nvt error
rama david
- [gmx-users] nvt error
Justin Lemkul
- [gmx-users] Output help
Marco Rougeth
- [gmx-users] Output help
Victor Rosas Garcia
- [gmx-users] Output help
Justin Lemkul
- [gmx-users] Output help
Justin Lemkul
- [gmx-users] Output help
Marco Rougeth
- [gmx-users] Output help
Mark Abraham
- [gmx-users] Output help
Marco Rougeth
- [gmx-users] Output help
Marco Rougeth
- [gmx-users] pdb2gmx cannot generate the right residue and atom numbers
WH
- [gmx-users] pdb2gmx cannot generate the right residue and atom numbers
João Martins
- [gmx-users] pdb2gmx cannot generate the right residue and atom numbers
Mark Abraham
- [gmx-users] pdb2gmx cannot generate the right residue and atom numbers
Mark Abraham
- [gmx-users] pdb2gmx cannot generate the right residue and atom numbers
WH
- [gmx-users] pdb2gmx cannot generate the right residue and atom numbers
Mark Abraham
- [gmx-users] Performance of beowulf cluster
Abhishek Acharya
- [gmx-users] Performance of beowulf cluster
Mirco Wahab
- [gmx-users] Performance of beowulf cluster
Szilárd Páll
- [gmx-users] Performance of beowulf cluster
Abhi Acharya
- [gmx-users] Performance of beowulf cluster
Szilárd Páll
- [gmx-users] Performance of beowulf cluster
Abhi Acharya
- [gmx-users] Plotting hydrogen bonds and salt bridges.
Dawid das
- [gmx-users] Plotting hydrogen bonds and salt bridges.
rajat desikan
- [gmx-users] pme ranks
xiexiaobin at sjtu.edu.cn
- [gmx-users] pme ranks
Carsten Kutzner
- [gmx-users] PMF calculation with three reaction coordinates
liaoxyi
- [gmx-users] PMF curve in umbrella sampling
Mana Ib
- [gmx-users] PMF curve in umbrella sampling
Justin Lemkul
- [gmx-users] PMF curve in umbrella sampling
Mana Ib
- [gmx-users] PMF curve in umbrella sampling
Justin Lemkul
- [gmx-users] Polymer not diffusing into membrane
Alex s
- [gmx-users] Polymer not diffusing into membrane
massimo sandal
- [gmx-users] Polymer not diffusing into membrane
Alex s
- [gmx-users] Polymer not diffusing into membrane
Justin Lemkul
- [gmx-users] Polymer not diffusing into membrane
Alex s
- [gmx-users] Polymer not diffusing into membrane
Justin Lemkul
- [gmx-users] Polymer not diffusing into membrane
Alex s
- [gmx-users] Polymer not diffusing into membrane
Justin Lemkul
- [gmx-users] Polymer not diffusing into membrane
Alex s
- [gmx-users] Polymer not diffusing into membrane
Justin Lemkul
- [gmx-users] Polymer not diffusing into membrane
Alex s
- [gmx-users] Positive potential energy during Energy minimization step
neha bharti
- [gmx-users] Positive potential energy during Energy minimization step
Justin Lemkul
- [gmx-users] Positive Potential Energy.
Dan Sponseller
- [gmx-users] Positive Potential Energy.
Justin Lemkul
- [gmx-users] Positive Potential Energy.
Tsjerk Wassenaar
- [gmx-users] potential energy
Meenakshi Rajput
- [gmx-users] potential energy
Justin Lemkul
- [gmx-users] potential energy
Meenakshi Rajput
- [gmx-users] potential energy
Justin Lemkul
- [gmx-users] potential energy
Meenakshi Rajput
- [gmx-users] potential energy
Justin Lemkul
- [gmx-users] potential energy
Meenakshi Rajput
- [gmx-users] potential energy
Meenakshi Rajput
- [gmx-users] potential energy
Justin Lemkul
- [gmx-users] pressure after NPT
ibrahim khalil
- [gmx-users] pressure after NPT
Justin Lemkul
- [gmx-users] Pressure coupling with stochastic integrator for triclinic box
Haiyang Zhang
- [gmx-users] Pressure coupling with stochastic integrator for triclinic box
Mark Abraham
- [gmx-users] Pressure coupling with stochastic integrator for triclinic box
Haiyang Zhang
- [gmx-users] Pressure coupling with stochastic integrator for triclinic box
Mark Abraham
- [gmx-users] Pressure coupling with stochastic integrator for triclinic box
Haiyang Zhang
- [gmx-users] pressure of NPT simulation after NVT simulation
ibrahim khalil
- [gmx-users] pressure of NPT simulation after NVT simulation
Justin Lemkul
- [gmx-users] Pressures after NPT
ibrahim khalil
- [gmx-users] Pressures after NPT
Justin Lemkul
- [gmx-users] Pressures after NPT
Justin Lemkul
- [gmx-users] Problem in Ligand-Protein complex in POPC
neha bharti
- [gmx-users] Problem in Ligand-Protein complex in POPC
Justin Lemkul
- [gmx-users] Problem in Ligand-Protein complex in POPC
neha bharti
- [gmx-users] Problem in Ligand-Protein complex in POPC
Justin Lemkul
- [gmx-users] Problem in Ligand-Protein complex in POPC
neha bharti
- [gmx-users] Problem in Ligand-Protein complex in POPC
Justin Lemkul
- [gmx-users] Problem with g_chi options
Florian Sittel
- [gmx-users] problems in numbers of scale down by 0.95 in KALP in DPPC tutorial
Mahboobe Sadr
- [gmx-users] problems in numbers of scale down by 0.95 in KALP in DPPC tutorial
Justin Lemkul
- [gmx-users] problems in numbers of scale down by 0.95 in KALP in DPPC tutorial
Justin Lemkul
- [gmx-users] problems in numbers of scale down by 0.95 in KALP in DPPC tutorial
Mahboobe Sadr
- [gmx-users] problems in numbers of scale down by 0.95 in KALP in DPPC tutorial
Justin Lemkul
- [gmx-users] problems in numbers of scale down by 0.95 in KALP in DPPC tutorial
Mahboobe Sadr
- [gmx-users] Protein drifting out of the box.
Dawid das
- [gmx-users] Protein drifting out of the box.
Justin Lemkul
- [gmx-users] Protein simulation including ligand with Fe(III)
Nikolaos Michelarakis
- [gmx-users] Protein simulation including ligand with Fe(III)
Justin Lemkul
- [gmx-users] Protein simulation including ligand with Fe(III)
Nikolaos Michelarakis
- [gmx-users] Protein simulation including ligand with Fe(III)
Justin Lemkul
- [gmx-users] Protein simulation including ligand with Fe(III)
Nikolaos Michelarakis
- [gmx-users] Protein simulation including ligand with Fe(III)
Nikolaos Michelarakis
- [gmx-users] Protein simulation including ligand with Fe(III)
Justin Lemkul
- [gmx-users] Protein simulation including ligand with Fe(III)
Nikolaos Michelarakis
- [gmx-users] Protein simulation including ligand with Fe(III)
Justin Lemkul
- [gmx-users] Protein simulation including ligand with Fe(III)
Nikolaos Michelarakis
- [gmx-users] Protein simulation including ligand with Fe(III)
Justin Lemkul
- [gmx-users] Protein simulation including ligand with Fe(III)
Justin Lemkul
- [gmx-users] Protein-ligand complex energy minimization
Indu Kumari
- [gmx-users] Protein-ligand complex energy minimization
Justin Lemkul
- [gmx-users] Protein-ligand complex energy minimization
Indu Kumari
- [gmx-users] Pull_geometry=cylinder
Alexandra Antipina
- [gmx-users] pulling force constant, pulling rate
Sathish Kumar
- [gmx-users] QM/MM simulation: point-charge, pbc and bOPT=yes problems
Bence Hégely
- [gmx-users] QM/MM simulation: point-charge, pbc and bOPT=yes problems
Mark Abraham
- [gmx-users] Questions about 1-4 interactions in alkanes
Andrew DeYoung
- [gmx-users] Questions about how to set up PME options correctly
Yunlong Liu
- [gmx-users] Questions on reducing large loading imbalance
Yunlong Liu
- [gmx-users] Questions on reducing large loading imbalance
Szilárd Páll
- [gmx-users] radial density profile
Atila Petrosian
- [gmx-users] radial density profile
Justin Lemkul
- [gmx-users] radial density profile
Atila Petrosian
- [gmx-users] radial density profile
Justin Lemkul
- [gmx-users] Recommendations on how to increase performance
Yunlong Liu
- [gmx-users] Regarding error in NPT SIMULATION in VACUM
vidhya sankar
- [gmx-users] Regarding error in NPT SIMULATION in VACUM
David van der Spoel
- [gmx-users] regarding g_hydorder
Nidhi Katyal
- [gmx-users] regarding MSD
Nidhi Katyal
- [gmx-users] regarding MSD
Nidhi Katyal
- [gmx-users] regarding MSD
Nidhi Katyal
- [gmx-users] Regarding simulation analysis and free energy calculation
rama david
- [gmx-users] Regarding simulation analysis and free energy calculation
Justin Lemkul
- [gmx-users] Regarding the largest charge group radii is larger than rlist and rcoulomb
rama david
- [gmx-users] REMD tutorial
shahab shariati
- [gmx-users] REMD tutorial
Mark Abraham
- [gmx-users] Restrain the COM of a group of atoms
zifeng li
- [gmx-users] Restrain the COM of a reference group in Umbrella sampling
zifeng li
- [gmx-users] RMSD graph over time and g_cluster RMSD distribution seem at odds with each other
ms
- [gmx-users] RMSD graph over time and g_cluster RMSD distribution seem at odds with each other
Tsjerk Wassenaar
- [gmx-users] RMSD graph over time and g_cluster RMSD distribution seem at odds with each other
ms
- [gmx-users] RMSD graph over time and g_cluster RMSD distribution seem at odds with each other
Tsjerk Wassenaar
- [gmx-users] RMSD graph over time and g_cluster RMSD distribution seem at odds with each other
ms
- [gmx-users] RMSD graph over time and g_cluster RMSD distribution seem at odds with each other
Justin Lemkul
- [gmx-users] RMSD graph over time and g_cluster RMSD distribution seem at odds with each other
ms
- [gmx-users] search in gromacs mailing list by subject
shahab shariati
- [gmx-users] search in gromacs mailing list by subject
Justin Lemkul
- [gmx-users] Segmentation fault mdrun
Alex s
- [gmx-users] Segmentation fault mdrun
Justin Lemkul
- [gmx-users] Segmentation fault mdrun
Alex s
- [gmx-users] Segmentation fault mdrun
Alex s
- [gmx-users] Segmentation fault mdrun
Justin Lemkul
- [gmx-users] Setting Non-bonded Scaling Constant for Amber FF
Johnny Lu
- [gmx-users] Setting Non-bonded Scaling Constant for Amber FF
Justin Lemkul
- [gmx-users] Setting Non-bonded Scaling Constant for Amber FF
Johnny Lu
- [gmx-users] Several questions about log file.
Theodore Si
- [gmx-users] Several questions about log file.
Mark Abraham
- [gmx-users] Simulating different pH values of water
Kester Wong
- [gmx-users] Simulating different pH values of water
Tsjerk Wassenaar
- [gmx-users] Simulating different pH values of water
Kester Wong
- [gmx-users] Simulation of Glass Surfaces?
AJ Lanphere
- [gmx-users] Simulation of Glass Surfaces?
AJ Lanphere
- [gmx-users] Simulation of Glass Surfaces?
Justin Lemkul
- [gmx-users] Simulation of Glass Surfaces?
AJ Lanphere
- [gmx-users] Simulation of Glass Surfaces?
AJ Lanphere
- [gmx-users] Simulation of Glass Surfaces?
Justin Lemkul
- [gmx-users] Simulation of Glass Surfaces?
AJ Lanphere
- [gmx-users] Simulation of Glass Surfaces?
Justin Lemkul
- [gmx-users] Simulation of Glass Surfaces?
AJ Lanphere
- [gmx-users] Simulation of Glass Surfaces?
Justin Lemkul
- [gmx-users] Simulation of Glass Surfaces?
AJ Lanphere
- [gmx-users] Solvent error?
Nikolaos Michelarakis
- [gmx-users] Solvent error?
Mark Abraham
- [gmx-users] Solvent error?
Nikolaos Michelarakis
- [gmx-users] Solvent error?
Mark Abraham
- [gmx-users] Solvent error?
Nikolaos Michelarakis
- [gmx-users] Solvent error?
Mark Abraham
- [gmx-users] Solvent error? (Mark Abraham)
Nikolaos Michelarakis
- [gmx-users] Solvent error? (Mark Abraham)
Mark Abraham
- [gmx-users] Solvent error? (Mark Abraham)
Tomasz Piskorz
- [gmx-users] Spherical Averaging (Debye formulation) in SAXS calculation!
Anjaiah Nalaparaju
- [gmx-users] SSE4 → AVX2
nicola staffolani
- [gmx-users] SSE4 → AVX2
Mark Abraham
- [gmx-users] SSE4 → AVX2
Mark Abraham
- [gmx-users] SSE4 → AVX2
Szilárd Páll
- [gmx-users] SSE4 → AVX2
Szilárd Páll
- [gmx-users] SSE4 → AVX2
Szilárd Páll
- [gmx-users] SSE4 → AVX2
Szilárd Páll
- [gmx-users] SSE4 → AVX2
nicola staffolani
- [gmx-users] SSE4 → AVX2
Mark Abraham
- [gmx-users] SSE4 → AVX2
nicola staffolani
- [gmx-users] SSE4 → AVX2
nicola staffolani
- [gmx-users] SSE4 → AVX2
nicola staffolani
- [gmx-users] SSE4 → AVX2
Mark Abraham
- [gmx-users] SSE4 → AVX2
Mark Abraham
- [gmx-users] SSE4 → AVX2
Szilárd Páll
- [gmx-users] SSE4 → AVX2
Szilárd Páll
- [gmx-users] SSE4 → AVX2
nicola staffolani
- [gmx-users] SSE4 → AVX2
Mark Abraham
- [gmx-users] SSE4 → AVX2
nicola staffolani
- [gmx-users] Steve
xiexiaobin at sjtu.edu.cn
- [gmx-users] Steve
Mark Abraham
- [gmx-users] Suggestions for Gromacs Perfomance
Dinesh Mali
- [gmx-users] Suggestions for Gromacs Perfomance
Szilárd Páll
- [gmx-users] Surface tension for membrane simulation
Xiang Ning
- [gmx-users] Time evolution of distance of Hydrogen bond
MUSYOKA THOMMAS
- [gmx-users] Time evolution of distance of Hydrogen bond
Justin Lemkul
- [gmx-users] Time varying electric field - phase term
steven shawn
- [gmx-users] Time varying electric field - phase term
Johnny Lu
- [gmx-users] Time varying electric field - phase term
steven shawn
- [gmx-users] Time varying electric field - phase term
Johnny Lu
- [gmx-users] Timesteps don't match
Oliver Schillinger
- [gmx-users] Timesteps don't match
Mark Abraham
- [gmx-users] Timesteps don't match
Oliver Schillinger
- [gmx-users] too many lincs warnings
Meenakshi Rajput
- [gmx-users] too many lincs warnings
Justin Lemkul
- [gmx-users] too many lincs warnings
Meenakshi Rajput
- [gmx-users] Too much PME mesh wall time.
Yunlong Liu
- [gmx-users] Too much PME mesh wall time.
Mark Abraham
- [gmx-users] treatment of electrostatics in vaccum
Sanku M
- [gmx-users] treatment of electrostatics in vaccum
Justin Lemkul
- [gmx-users] treatment of electrostatics in vaccum
Erik Marklund
- [gmx-users] Umbrella Sampling - no PMF plateau
Steven Neumann
- [gmx-users] Umbrella Sampling - no PMF plateau
Brian Yoo
- [gmx-users] Umbrella Sampling - no PMF plateau
Steven Neumann
- [gmx-users] Unknown cmap torsion between atoms
Xiang Ning
- [gmx-users] Unknown cmap torsion between atoms
Justin Lemkul
- [gmx-users] Unknown cmap torsion between atoms
Xiang Ning
- [gmx-users] Unknown cmap torsion between atoms
Justin Lemkul
- [gmx-users] Unknown cmap torsion between atoms
Xiang Ning
- [gmx-users] Unknown cmap torsion between atoms
Justin Lemkul
- [gmx-users] Unknown cmap torsion between atoms
xiang_ning at yahoo.com
- [gmx-users] updates about ACPYPE
Alan
- [gmx-users] User-PME
O'Neill, David
- [gmx-users] User-PME
Mark Abraham
- [gmx-users] User-PME
O'Neill, David
- [gmx-users] User-PME
O'Neill, David
- [gmx-users] User-PME
Mark Abraham
- [gmx-users] Using g_dipoles to calculate dipole auto-correlation function
James Zhu
- [gmx-users] Velocity Distribution Calculation
朱文鹏
- [gmx-users] Velocity Distribution Calculation
朱文鹏
- [gmx-users] Velocity Distribution Calculation
Justin Lemkul
- [gmx-users] Warning in the Tabulated potential.
Udaya Dahal
- [gmx-users] Water droplet moving away from surface
Kester Wong
- [gmx-users] water dynamics
pratibha kapoor
- [gmx-users] water dynamics
pratibha kapoor
- [gmx-users] Water model used.
Dawid das
- [gmx-users] Water model used.
Justin Lemkul
- [gmx-users] Water molecule near protein surface cannot be settled.
Dawid das
- [gmx-users] Water molecule near protein surface cannot be settled.
Justin Lemkul
- [gmx-users] Water molecule near protein surface cannot be settled.
Dawid das
- [gmx-users] Water molecule near protein surface cannot be settled.
Justin Lemkul
- [gmx-users] Water molecule near protein surface cannot be settled.
Dawid das
- [gmx-users] Water molecule near protein surface cannot be settled.
Justin Lemkul
- [gmx-users] Water molecule near protein surface cannot be settled.
Dawid das
- [gmx-users] Water molecule near protein surface cannot be settled.
Justin Lemkul
- [gmx-users] Water molecule near protein surface cannot be settled.
Dawid das
- [gmx-users] Water molecule near protein surface cannot be settled.
Tsjerk Wassenaar
- [gmx-users] Water molecule near protein surface cannot be settled.
Mark Abraham
- [gmx-users] Water molecule near protein surface cannot be settled.
Dawid das
- [gmx-users] Water molecule near protein surface cannot be settled.
Dawid das
- [gmx-users] water not getting settle
Lovika Moudgil
- [gmx-users] water not getting settle
Mark Abraham
- [gmx-users] What does g_rama calculate?
Dawid das
- [gmx-users] What does g_rama calculate?
Justin Lemkul
- [gmx-users] What does g_rama calculate?
Dawid das
- [gmx-users] What does PHE(OL) mean?
Andrew DeYoung
- [gmx-users] What files do not necessary for analysis?
Batdorj Batsaikhan
- [gmx-users] What files should I delete after simulation?
Batdorj Batsaikhan
- [gmx-users] Why is there a NxN VdW [F] on a separate line?
Theodore Si
- [gmx-users] Why is there a NxN VdW [F] on a separate line?
Mark Abraham
- [gmx-users] Why is there a NxN VdW [F] on a separate line?
Theodore Si
- [gmx-users] Why is there a NxN VdW [F] on a separate line?
Theodore Si
- [gmx-users] Why is there a NxN VdW [F] on a separate line?
Mark Abraham
- [gmx-users] Why is there a NxN VdW [F] on a separate line?
Mark Abraham
- [gmx-users] Why we are not using GPU to solve FFT?
Theodore Si
- [gmx-users] Why we are not using GPU to solve FFT?
Mark Abraham
- [gmx-users] X-ray Diffraction (XRD)
Cyrus Djahedi
- [gmx-users] 答复: Questions on reducing large loading imbalance
Yunlong Liu
- [gmx-users] 转发:entropy calculation by g_anaeig
sunyeping
Last message date:
Sun Aug 31 23:15:01 CEST 2014
Archived on: Sun Aug 31 23:15:02 CEST 2014
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