[gmx-users] concatenate NAMD trajectories

Justin Lemkul jalemkul at vt.edu
Thu Aug 14 15:18:15 CEST 2014

On 8/14/14, 9:16 AM, Natal Kanaan wrote:
> Hi,
> thanks a lot for your quick reply, but I still have a doubt about how to
> "translate" my trjcat command to trjconv:
> trjconv -t0 -timestep XX -f one.dcd two.dcd three.dcd -o total

trjconv does not accept multiple entries to -f.  Use the concatenated .dcd file 
from trjcat.

> what do I need to add instead of "-t0"?
> should I add my timestep instead of XX (in ps)?

Please read trjconv -h.



Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441


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