[gmx-users] linking lipid covalently to protein...

[Dr. Vitaly Chaban]

Nohow.

Because the peptide is not covalently bound to the lipid.


Dr. Vitaly V. Chaban

Виталий Витальевич ЧАБАН




On Tue, Aug 12, 2014 at 6:57 PM, Ozbil, Mehmet <m.ozbil at umiami.edu> wrote:
> Hello,
>
>
> I am trying to run a GROMACS simulation with few amino acids covalently bound to Palmitoyl-linoleylphosphatidylcholine molecules., by using GROMOS ff. I found the lipid structure and parameters on Tieleman`s website, but I don`t know how to get the parameters for covalently bound molecule. Can you suggest any tutorial or any documentation? ? Thank you.
>
>
> Best,
>
> Mehmet Ozbil
>
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