[gmx-users] Protein drifting out of the box.

Dawid das addiw7 at googlemail.com
Tue Aug 19 18:45:28 CEST 2014

Dear Gromacs experts,

In my MD simulation I noticed that protein drifts toward one of the faces
of cubic solvation box. Now I use periodic boundary conditions but one of
the residues sticks out of solvation box. My general question is: is it
okay or should I be aware of such a system behaviour?

Best wishes,

Dawid Grabarek

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