[gmx-users] DSSP

[Nikolaos Michelarakis]

Hello,

I am trying to do a secondary structure analysis to get the percentages of
each secondary structure in my protein. I know i can use do_dssp but
unfortunately DSSP is not installed on the cluster that i have been using
and i do not have the acess to install it. Any other ways to do it? or
would anyone be able to run it for me? I need it for 3 structures, for 3
different forcefields, 9 structures overall.

Thanks a lot,

Nicholas