[gmx-users] Monitor distance between atoms

[Eric Smoll]

Hello Gromacs Users,

Is there a way to output the distance between and atom X and all atoms
within distance R of atom X along a trajectory?

I am paging through the manual but I can't seem to find anything like this.

I would settle for the coordinates of all atoms within a distance R of atom
X along the trajectory as well.

Best,
Eric