[gmx-users] Peptide orientation

pratibha kapoorpratibha7 at gmail.com
Sun Feb 9 15:34:44 CET 2014

Dear gromacs users

I have two peptides with their initial conformation as beta strand each. I
have to place them laterally in antiparallel fashion before I can begin my
simulation. I am aware that the random placement that can be done by ci
option of genbox. 
But how to place peptides in specific orientations at specific distances.
Any help is appreciated.

Thanks in advance.

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