[gmx-users] input error?

Urszula Uciechowska urszula.uciechowska at biotech.ug.edu.pl
Thu Jul 31 14:41:49 CEST 2014


I have changed the Pcoupl into parrinello-rahman and I have still the same
error. The input file was taken from the martini webpage
http://md.chem.rug.nl/cgmartini/index.php/proteins


define           =  -DPOSRES
dt               =  0.02
nsteps           =  25000
nstxout          =  0
nstvout          =  0
nstlog           =  100
nstxtcout        =  100
xtc-precision    =  10
rlist            =  1.4
coulombtype      =  shift
rcoulomb         =  1.2
epsilon_r        =  15
vdw-type         =  shift
rvdw-switch      =  0.9
rvdw             =  1.2
tcoupl           =  v-rescale
tc-grps          =  Protein W
tau-t            =  1.0 1.0
ref-t            =  300 300
Pcoupl           =  parrinello-rahman
Pcoupltype       =  isotropic
tau-p            =  12.0
compressibility  =  3e-4
ref-p            =  1.0
refcoord_scaling =  all

Urszula Uciechowska
~


-----------------------------------------
Ta wiadomość została wysłana z serwera Uniwersytetu Gdańskiego
http://www.ug.edu.pl/



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