[gmx-users] Double parameters

[Mark Abraham]

No. Your protein parameters will be common to both, and your water-ion
interactions are defined implicitly by whatever you'd choose for their
interactions with protein. Moreover, you'd have no reason to suppose the
combination would work. See
http://www.gromacs.org/Documentation/Terminology/Force_Fields

Mark


On Fri, Mar 21, 2014 at 2:44 PM, Josip Lovrić <josip7lovric at gmail.com>wrote:

> Hello dear gromacs users,
>
> lets say that we have 3 kinds of molecules in our system, for example
> water, protein and some ions. Is it possible to have one set Force field
> parameters of protein for  protein-water and other for protein-ions
> interaction.
>
> Best Regards,
> Josip Lovrić
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>