[gmx-users] electric filed

Albert mailmd2011 at gmail.com
Mon Sep 8 20:48:34 CEST 2014


Hello:

I am simulating a protein in lipids bilyaer and I am going to apply 50mV 
voltage across the bilayer. I noticed this paper:

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0056342

The author did in Gromacs. I noticed that there is a "Electric 
fieldselectric field" option for mdp file, So I am just wondering will 
the following setting would be enough for my purpose:

E_z        = 1  0.08  1

All the other settings would be the same as normal membrane protein 
simulation as indicated in Gromacs tutorial.

Thank you very much.

Albert


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