September 2014 Archives by subject
Starting: Mon Sep 1 00:27:51 CEST 2014
Ending: Tue Sep 30 23:40:03 CEST 2014
Messages: 738
- [gmx-users] "Coul. Recip." in Logfile for Classical Ewald
Barnett, James W.
- [gmx-users] "Coul. Recip." in Logfile for Classical Ewald
Mark Abraham
- [gmx-users] "Warning: For efficient BFGS minimization, use shift/switch/PME instead of cut-off"
GAYATHRI S
- [gmx-users] "Warning: For efficient BFGS minimization, use shift/switch/PME instead of cut-off"
Justin Lemkul
- [gmx-users] (no subject)
Somayeh Alimohammadi
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
Namita Singh
- [gmx-users] (no subject)
Namita Singh
- [gmx-users] (no subject)
bipin singh
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
Namita Singh
- [gmx-users] (no subject)
Justin Lemkul
- [gmx-users] (no subject)
Mahboobeh Eslami
- [gmx-users] (no subject)
Erik Marklund
- [gmx-users] -res option in g_rmsf
Dawid das
- [gmx-users] -res option in g_rmsf
Tsjerk Wassenaar
- [gmx-users] -res option in g_rmsf
Dawid das
- [gmx-users] 2D diagram
Andrei Neamtu
- [gmx-users] 2D diagram
andrea
- [gmx-users] 2D diagram
Andrei Neamtu
- [gmx-users] 4.6.7 can't get regression test.
Johnny Lu
- [gmx-users] 4.6.7 can't get regression test.
Johnny Lu
- [gmx-users] [ANN] MDTraj 1.0: Trajectory Analysis in Python
Robert McGibbon
- [gmx-users] [CfP] 5th International Workshop on Model-driven Approaches for Simulation Engineering (Mod4Sim)
Daniele Gianni
- [gmx-users] About .rtp File
Mohd Farid Ismail
- [gmx-users] About .rtp File
João Martins
- [gmx-users] About .rtp File
Mohd Farid Ismail
- [gmx-users] About .rtp File
João Martins
- [gmx-users] About .rtp File
Mohd Farid Ismail
- [gmx-users] About .rtp File
Mark Abraham
- [gmx-users] About .rtp File
Mohd Farid Ismail
- [gmx-users] Add missing residue
Nizar Masbukhin
- [gmx-users] Add missing residue
Mark Abraham
- [gmx-users] Add missing residue
Johnny Lu
- [gmx-users] Add missing residue
Nizar Masbukhin
- [gmx-users] Add missing residue
Nizar Masbukhin
- [gmx-users] adding ions in the genion for multimeric proteins
Ambarnil Ghosh
- [gmx-users] adding ions in the genion for multimeric proteins
rajat desikan
- [gmx-users] adding ions in the genion for multimeric proteins
Dallas Warren
- [gmx-users] All atom MD Simulation
Anitha
- [gmx-users] All atom MD Simulation
Justin Lemkul
- [gmx-users] All atom MD Simulation
Ullmann, Thomas
- [gmx-users] AMBER FF naming and caps
Ebert Maximilian
- [gmx-users] AMBER FF naming and caps
Justin Lemkul
- [gmx-users] AMBER FF naming and caps
Ebert Maximilian
- [gmx-users] angle definitions ga_ ? gromos53a6
Despoina Tzeli
- [gmx-users] angle definitions ga_ ? gromos53a6
Justin Lemkul
- [gmx-users] angle definitions ga_ ? gromos53a6
Despoina Tzeli
- [gmx-users] apoenzyme wanted
N. S.
- [gmx-users] apoenzyme wanted
Justin Lemkul
- [gmx-users] Bond Energy question.
Dan Sponseller
- [gmx-users] Bond Energy question.
Mark Abraham
- [gmx-users] Box Vectors in .gro file
Hardy, Adam
- [gmx-users] Box Vectors in .gro file
Johnny Lu
- [gmx-users] Calculating the flow of water through a surface
akari karin
- [gmx-users] Calculation Excess Chemical Potential of Bulk Water
Kim Q Hwan
- [gmx-users] Calculation Excess Chemical Potential of Bulk Water
Justin Lemkul
- [gmx-users] Calculation Excess Chemical Potential of Bulk Water
Kim Q Hwan
- [gmx-users] Can I calculate free energy of Tutorial 1 of Justin's tutorials?
Batdorj Batsaikhan
- [gmx-users] Can I calculate free energy of Tutorial 1 of Justin's tutorials?
Justin Lemkul
- [gmx-users] Can I simulate heavy atoms in my system?
Batdorj Batsaikhan
- [gmx-users] Can I simulate heavy atoms in my system?
Justin Lemkul
- [gmx-users] can we do FEP MAPPER calculation in Gromacs?
Albert
- [gmx-users] changing the viscosity of water in a simulation
soumadwip ghosh
- [gmx-users] changing the viscosity of water in a simulation
Dr. Vitaly Chaban
- [gmx-users] changing the viscosity of water in a simulation
Christoph Junghans
- [gmx-users] charmm topology for unknown residues in GMX
xy21hb
- [gmx-users] charmm topology for unknown residues in GMX
Justin Lemkul
- [gmx-users] CHARMM36: No default U-B types
Victor Sojo
- [gmx-users] CHARMM36: No default U-B types
Justin Lemkul
- [gmx-users] Commands to run simulations using multiple GPU's in version 5.0.1
Siva Dasetty
- [gmx-users] Commands to run simulations using multiple GPU's in version 5.0.1
Johnny Lu
- [gmx-users] Commands to run simulations using multiple GPU's in version 5.0.1
Siva Dasetty
- [gmx-users] Commands to run simulations using multiple GPU's in version 5.0.1
Johnny Lu
- [gmx-users] Commands to run simulations using multiple GPU's in version 5.0.1
Johnny Lu
- [gmx-users] Commands to run simulations using multiple GPU's in version 5.0.1
Siva Dasetty
- [gmx-users] Commands to run simulations using multiple GPU's in version 5.0.1
Szilárd Páll
- [gmx-users] Commands to run simulations using multiple GPU's in version 5.0.1
Johnny Lu
- [gmx-users] Commands to run simulations using multiple GPU's in version 5.0.1
Johnny Lu
- [gmx-users] Compatibility of Files Between Version, Precision, and Compilation
Johnny Lu
- [gmx-users] Compatibility of Files Between Version, Precision, and Compilation
Mark Abraham
- [gmx-users] Compatibility of Files Between Version, Precision, and Compilation
Johnny Lu
- [gmx-users] Compatibility of Files Between Version, Precision, and Compilation
Johnny Lu
- [gmx-users] Compatibility of Files Between Version, Precision, and Compilation
Mark Abraham
- [gmx-users] Compatibility of Files Between Version, Precision, and Compilation
Johnny Lu
- [gmx-users] Compatibility of Files Between Version, Precision, and Compilation
Johnny Lu
- [gmx-users] Compatibility of Files Between Version, Precision, and Compilation
Mark Abraham
- [gmx-users] Compatibility of Files Between Version, Precision, and Compilation
Mark Abraham
- [gmx-users] Compile and Run on Xsede
Johnny Lu
- [gmx-users] Compile and Run on Xsede
Justin Lemkul
- [gmx-users] Compile and Run on Xsede
Johnny Lu
- [gmx-users] Compiling GROMACS 4.5.6 in Cluster
Agnivo Gosai
- [gmx-users] Compiling GROMACS 4.5.6 in Cluster
Justin Lemkul
- [gmx-users] Configuration bug preventing GROMACS 5.0 build with Intel compiler?
Paul Caheny
- [gmx-users] Configuration bug preventing GROMACS 5.0 build with Intel compiler?
Mark Abraham
- [gmx-users] Constraint and Temperature Drop in NVE
Johnny Lu
- [gmx-users] Constraint and Temperature Drop in NVE
Johnny Lu
- [gmx-users] Constraint and Temperature Drop in NVE
Johnny Lu
- [gmx-users] Constraint and Temperature Drop in NVE
Johnny Lu
- [gmx-users] Constraint and Temperature Drop in NVE
Mark Abraham
- [gmx-users] Constraint and Temperature Drop in NVE
Johnny Lu
- [gmx-users] Constraint and Temperature Drop in NVE
Johnny Lu
- [gmx-users] Constraint and Temperature Drop in NVE
Johnny Lu
- [gmx-users] Constraint and Temperature Drop in NVE
Johnny Lu
- [gmx-users] Constraint and Temperature Drop in NVE
Mark Abraham
- [gmx-users] Constraint and Temperature Drop in NVE
Justin Lemkul
- [gmx-users] Constraint and Temperature Drop in NVE
Johnny Lu
- [gmx-users] Constraint and Temperature Drop in NVE
Justin Lemkul
- [gmx-users] Contact angle measurement on a flat surface
Kester Wong
- [gmx-users] Contact angle measurement on a flat surface
Mark Abraham
- [gmx-users] Contact angle measurement on a flat surface
Kester Wong
- [gmx-users] conversion of the AMBER parameters to GROMACS with negative barrier height values
ABEL Stephane 175950
- [gmx-users] conversion of the AMBER parameters to GROMACS with negative barrier height values
Justin Lemkul
- [gmx-users] conversion of the AMBER parameters to GROMACS with negative barrier height values
Tamir Dingjan
- [gmx-users] Converting multiple crystal structure PDB's into .xtc file
Tsjerk Wassenaar
- [gmx-users] Converting multiple crystal structure PDB's into .xtc file
Michael Carter
- [gmx-users] Converting multiple crystal structure PDB's into .xtc file
Michael Carter
- [gmx-users] Converting TIPS3P model to SWM4-NDP model
Kester Wong
- [gmx-users] Converting TIPS3P model to SWM4-NDP model
Justin Lemkul
- [gmx-users] Converting TIPS3P model to SWM4-NDP model
Kester Wong
- [gmx-users] Converting TIPS3P model to SWM4-NDP model
Justin Lemkul
- [gmx-users] Converting TIPS3P model to SWM4-NDP model
Kester Wong
- [gmx-users] Converting TIPS3P model to SWM4-NDP model
Justin Lemkul
- [gmx-users] Coordinate File and Origin in Gromacs // Separating Bilayer Leaflets
Neha Shafique
- [gmx-users] Coordinate File and Origin in Gromacs // Separating Bilayer Leaflets
Justin Lemkul
- [gmx-users] correction of g_principal bug
nicola staffolani
- [gmx-users] correction of g_principal bug
Justin Lemkul
- [gmx-users] correction of g_principal bug
nicola staffolani
- [gmx-users] correction of g_principal bug
Justin Lemkul
- [gmx-users] correction of g_principal bug
nicola staffolani
- [gmx-users] Counting Interactions in vacuo ..
Mark Abraham
- [gmx-users] Creating an ITP file for charmm27
Kester Wong
- [gmx-users] Creating an ITP file for charmm27
Justin Lemkul
- [gmx-users] Cuda CC 2.0 restrictions
Mirco Wahab
- [gmx-users] Cuda CC 2.0 restrictions
Mark Abraham
- [gmx-users] Cuda CC 2.0 restrictions
Szilárd Páll
- [gmx-users] Cuda CC 2.0 restrictions
Mirco Wahab
- [gmx-users] Cuda CC 2.0 restrictions
Szilárd Páll
- [gmx-users] Different cutoffs for different interactions?
Aranha, Michelle
- [gmx-users] Different cutoffs for different interactions?
Justin Lemkul
- [gmx-users] Different energies of GPU and CPU-only runs with Gromacs 5.x
Machtens, Jan-Philipp
- [gmx-users] Different energies of GPU and CPU-only runs with Gromacs 5.x
Mark Abraham
- [gmx-users] Different energies of GPU and CPU-only runs with Gromacs 5.x
Machtens, Jan-Philipp
- [gmx-users] Different energies of GPU and CPU-only runs with Gromacs 5.x
Mark Abraham
- [gmx-users] Different energies of GPU and CPU-only runs with Gromacs 5.x
Johnny Lu
- [gmx-users] Different energies of GPU and CPU-only runs with Gromacs 5.x
Machtens, Jan-Philipp
- [gmx-users] Different fudge scaling against the default ones
Chandan Choudhury
- [gmx-users] Different fudge scaling against the default ones
Mark Abraham
- [gmx-users] distance tracking
h.alizadeh at znu.ac.ir
- [gmx-users] distance tracking
Justin Lemkul
- [gmx-users] Does Gmx 5.0 on GPUs support CMAP in Charmm?
Steven Neumann
- [gmx-users] Does Gmx 5.0 on GPUs support CMAP in Charmm?
Mark Abraham
- [gmx-users] Does Gmx 5.0 on GPUs support CMAP in Charmm?
Steven Neumann
- [gmx-users] Does Gmx 5.0 on GPUs support CMAP in Charmm?
Mark Abraham
- [gmx-users] Does Gmx 5.0 on GPUs support CMAP in Charmm?
Justin Lemkul
- [gmx-users] Does Gmx 5.0 on GPUs support CMAP in Charmm?
Steven Neumann
- [gmx-users] Does Gmx 5.0 on GPUs support CMAP in Charmm?
Steven Neumann
- [gmx-users] Does Gmx 5.0 on GPUs support CMAP in Charmm?
Justin Lemkul
- [gmx-users] Does Gmx 5.0 on GPUs support CMAP in Charmm?
Mark Abraham
- [gmx-users] does gromacs-4.6 support intel core Quad Q9550 cpu?
Vedat Durmaz
- [gmx-users] does gromacs-4.6 support intel core Quad Q9550 cpu?
Mirco Wahab
- [gmx-users] does gromacs-4.6 support intel core Quad Q9550 cpu?
Mark Abraham
- [gmx-users] does gromacs-4.6 support intel core Quad Q9550 cpu?
Vedat Durmaz
- [gmx-users] does gromacs-4.6 support intel core Quad Q9550 cpu?
Vedat Durmaz
- [gmx-users] does gromacs-4.6 support intel core Quad Q9550 cpu?
Mark Abraham
- [gmx-users] does gromacs-4.6 support intel core Quad Q9550 cpu?
Vedat Durmaz
- [gmx-users] does gromacs-4.6 support intel core Quad Q9550 cpu?
Mark Abraham
- [gmx-users] Electric fields in gromacs
David van der Spoel
- [gmx-users] electric filed
Albert
- [gmx-users] Electrostatic energy between two groups of atoms
h.alizadeh at znu.ac.ir
- [gmx-users] Electrostatic energy between two groups of atoms
Justin Lemkul
- [gmx-users] Energy minimization problem after editconf step
neha bharti
- [gmx-users] Energy minimization problem after editconf step
Justin Lemkul
- [gmx-users] Energy minimization problem after editconf step
neha bharti
- [gmx-users] Energy minimization problem after editconf step
Justin Lemkul
- [gmx-users] error in running pdb2gmx
Yaser Hosseini
- [gmx-users] Error with g_wham reading .pdo files
Lyna Luo
- [gmx-users] Error with g_wham reading .pdo files
Justin Lemkul
- [gmx-users] Error with g_wham reading .pdo files
Lyna Luo
- [gmx-users] Exclude from [defaults] fudge values
Tamir Dingjan
- [gmx-users] extracting from TRR
N. S.
- [gmx-users] extracting from TRR
Justin Lemkul
- [gmx-users] extracting from TRR
niyaz.sabir
- [gmx-users] extracting from TRR
Matthias Ernst
- [gmx-users] extracting from TRR
niyaz.sabir
- [gmx-users] FEP residue mutation tutorial
Carlos Navarro Retamal
- [gmx-users] force
xiexiaobin at sjtu.edu.cn
- [gmx-users] force
xiexiaobin at sjtu.edu.cn
- [gmx-users] force
Mark Abraham
- [gmx-users] force
xiexiaobin at sjtu.edu.cn
- [gmx-users] force
Szilárd Páll
- [gmx-users] Fw: minimization for final configuration
Mahboobeh Eslami
- [gmx-users] Fw: minimization for final configuration
Justin Lemkul
- [gmx-users] FW: Query regarding performance varies hugely in two similar systems
Mousumi Bhattacharyya
- [gmx-users] Fwd: Regarding Umbrella samplling
Sathish Kumar
- [gmx-users] g-select failed
Albert
- [gmx-users] g-select failed
Teemu Murtola
- [gmx-users] g-select failed
Albert
- [gmx-users] g-select failed
Teemu Murtola
- [gmx-users] g_dos -n
xy21hb
- [gmx-users] g_dos -n
xy21hb
- [gmx-users] g_dos -n
David van der Spoel
- [gmx-users] g_energy -vis Question, Bug #1516
Cantu, David
- [gmx-users] g_energy -vis Question, Bug #1516
Mark Abraham
- [gmx-users] g_energy -vis Question, Bug #1516
Cantu, David
- [gmx-users] g_energy reporting 0.0000 interaction energy between energy groups in GPU run?
Leandro Bortot
- [gmx-users] g_energy reporting 0.0000 interaction energy between energy groups in GPU run?
Justin Lemkul
- [gmx-users] g_energy reporting 0.0000 interaction energy between energy groups in GPU run?
Leandro Bortot
- [gmx-users] g_energy_d average
Johnny Lu
- [gmx-users] g_energy_d average
Justin Lemkul
- [gmx-users] g_energy_d average
Johnny Lu
- [gmx-users] g_hbond -shell option
Thomas Evangelidis
- [gmx-users] g_mindist for hydrophobic interactions
Ca C.
- [gmx-users] g_mindist for hydrophobic interactions
Erik Marklund
- [gmx-users] g_mindist for hydrophobic interactions
lloyd riggs
- [gmx-users] g_order and gromacs 5.0
sa
- [gmx-users] g_select syntax
Bin Liu
- [gmx-users] g_select syntax
Teemu Murtola
- [gmx-users] g_tune_pme and verlet
Åke Sandgren
- [gmx-users] g_tune_pme and verlet
Carsten Kutzner
- [gmx-users] g_tune_pme and verlet
Åke Sandgren
- [gmx-users] g_tune_pme and verlet
Mark Abraham
- [gmx-users] g_tune_pme and verlet
Åke Sandgren
- [gmx-users] g_tune_pme crashes in 5.0.1
Oliver Schillinger
- [gmx-users] g_tune_pme crashes in 5.0.1
Mark Abraham
- [gmx-users] g_tune_pme crashes in 5.0.1
Oliver Schillinger
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Ebert Maximilian
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Carsten Kutzner
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Ebert Maximilian
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Carsten Kutzner
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Ebert Maximilian
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Carsten Kutzner
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Mark Abraham
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Carsten Kutzner
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Mark Abraham
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Carsten Kutzner
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Ebert Maximilian
- [gmx-users] g_tune_pme_mpi is not compatible to mdrun_mpi
Carsten Kutzner
- [gmx-users] g_velacc g_dos not match!
xy21hb
- [gmx-users] GPU and MPI
Oliver Schillinger
- [gmx-users] GPU and MPI
Carsten Kutzner
- [gmx-users] GPU and MPI
Da-Wei Li
- [gmx-users] GPU and MPI
Carsten Kutzner
- [gmx-users] GPU and MPI
Da-Wei Li
- [gmx-users] GPU and MPI
Carsten Kutzner
- [gmx-users] GPU and MPI
Szilárd Páll
- [gmx-users] GPU and MPI
Da-Wei Li
- [gmx-users] GPU and MPI
Da-Wei Li
- [gmx-users] GPU and MPI
Albert
- [gmx-users] GPU and MPI
Yunlong Liu
- [gmx-users] GPU and MPI
Albert
- [gmx-users] GPU and MPI
Da-Wei Li
- [gmx-users] GPU and MPI
Albert
- [gmx-users] GPU and MPI
Da-Wei Li
- [gmx-users] GPU job failed
Albert
- [gmx-users] GPU job failed
Szilárd Páll
- [gmx-users] GPU job failed
Yunlong Liu
- [gmx-users] GPU job failed
Albert
- [gmx-users] GPU job failed
Albert
- [gmx-users] GPU job failed
Carsten Kutzner
- [gmx-users] GPU job failed
Albert
- [gmx-users] GPU job failed
Albert
- [gmx-users] GPU job failed
Albert
- [gmx-users] GPU waits for CPU, any remedies?
Michael Brunsteiner
- [gmx-users] GPU waits for CPU, any remedies?
Szilárd Páll
- [gmx-users] GPU waits for CPU, any remedies?
Szilárd Páll
- [gmx-users] GPU waits for CPU, any remedies?
Michael Brunsteiner
- [gmx-users] GPU waits for CPU, any remedies?
Michael Brunsteiner
- [gmx-users] GPU waits for CPU, any remedies?
Szilárd Páll
- [gmx-users] GPU waits for CPU, any remedies?
Szilárd Páll
- [gmx-users] GPU waits for CPU, any remedies?
Michael Brunsteiner
- [gmx-users] GPU waits for CPU, any remedies?
Michael Brunsteiner
- [gmx-users] GPU waits for CPU, any remedies?
Szilárd Páll
- [gmx-users] GPU waits for CPU, any remedies?
Szilárd Páll
- [gmx-users] graph rmsd and rmsf(backbone)
RINU KHATTRI
- [gmx-users] graph rmsd and rmsf(backbone)
Justin Lemkul
- [gmx-users] GROM (.mdp, .itp, .top) and .pdb Editor with Syntax Highlighting
Hovakim Grabski
- [gmx-users] GROM (.mdp, .itp, .top) and .pdb Editor with Syntax Highlighting
Александр Селютин
- [gmx-users] GROM (.mdp, .itp, .top) and .pdb Editor with Syntax Highlighting
Hovakim Grabski
- [gmx-users] GROM (.mdp, .itp, .top) and .pdb Editor with Syntax Highlighting
Johnny Lu
- [gmx-users] GROM v0.6 Release Notes
Hovakim Grabski
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
Carsten Kutzner
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
David McGiven
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
Szilárd Páll
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
David McGiven
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
Szilárd Páll
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
David McGiven
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
Abhi Acharya
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
David McGiven
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
David McGiven
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
Abhi Acharya
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What went wrong ?
Mark Abraham
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What wentwrong ?
Abhishek Acharya
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What wentwrong ?
Mark Abraham
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What wentwrong ?
Szilárd Páll
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What wentwrong ?
Abhi Acharya
- [gmx-users] Gromacs 5.0 compilation slower than 4.6.5. What wentwrong ?
David McGiven
- [gmx-users] gromacs 5.0 compile with QM/MM
高军
- [gmx-users] gromacs 5.0 compile with QM/MM
Yerko Escalona
- [gmx-users] Gromacs 5.0.1 is released
Mark Abraham
- [gmx-users] gromacs command grompp error
Yaser Hosseini
- [gmx-users] gromacs command grompp error
Justin Lemkul
- [gmx-users] gromacs command grompp error
Yaser Hosseini
- [gmx-users] gromacs command grompp error
Justin Lemkul
- [gmx-users] GROMACS efficiency on Maxwell GPUs
Bin Liu
- [gmx-users] gromacs error
Yaser Hosseini
- [gmx-users] gromacs error
Justin Lemkul
- [gmx-users] gromacs in parallel
Marcela Madrid
- [gmx-users] gromacs-4.6.5 topol file error
Yaser Hosseini
- [gmx-users] gromacs-4.6.5 topol file error
Justin Lemkul
- [gmx-users] gromacs-4.6.5 topol file error
yaser
- [gmx-users] gromacs-4.6.5 topol file error
Justin Lemkul
- [gmx-users] gromacs-4.6.5 topol file error
Yaser Hosseini
- [gmx-users] gromacs.org_gmx-users Digest, Vol 125, Issue 20
Ambarnil Ghosh
- [gmx-users] gromacs.org_gmx-users Digest, Vol 125, Issue 59
Agnivo Gosai
- [gmx-users] grompp help
Yaser Hosseini
- [gmx-users] grompp help
Justin Lemkul
- [gmx-users] grompp help
Charles Li
- [gmx-users] grompp help
yaser
- [gmx-users] grompp help
Justin Lemkul
- [gmx-users] grompp help
yaser
- [gmx-users] Hello Regarding Lincs error
Ujwala Patil
- [gmx-users] Hello Regarding Lincs error
RINU KHATTRI
- [gmx-users] Hello Regarding Lincs error
Justin Lemkul
- [gmx-users] Hello Regarding Lincs error
Justin Lemkul
- [gmx-users] Hello Regarding Lincs error
RINU KHATTRI
- [gmx-users] Hello Regarding Lincs error
Justin Lemkul
- [gmx-users] HELP: g_velacc g_dos not match
xy21hb
- [gmx-users] HELP: g_velacc g_dos not match
David van der Spoel
- [gmx-users] Help: protein-membrane docking
LIPSCOMB, THOMAS
- [gmx-users] Help: protein-membrane docking
Justin Lemkul
- [gmx-users] How are the clusters of particles created?
Theodore Si
- [gmx-users] How are the clusters of particles created?
Mark Abraham
- [gmx-users] How can I select a group number automatically
Xiaobin Cao
- [gmx-users] How can I select a group number automatically
Chandan Choudhury
- [gmx-users] How can I select a group number automatically
Erik Marklund
- [gmx-users] How can I select a group number automatically
Xiaobin Cao
- [gmx-users] How can I select a group number automatically
Mark Abraham
- [gmx-users] How can I select a group number automatically
Xiaobin Cao
- [gmx-users] how can we export protein without hydrogen?
Albert
- [gmx-users] how can we export protein without hydrogen?
Justin Lemkul
- [gmx-users] how can we restrain ion position?
Albert
- [gmx-users] how can we restrain ion position?
Justin Lemkul
- [gmx-users] How to combine Slipid FF with amber FF?
Yorquant Wang
- [gmx-users] How to combine Slipid FF with amber FF?
Justin Lemkul
- [gmx-users] How to compute self diffusivities when the xtc trajectory file contains only a subset of atoms
rocwhite168
- [gmx-users] How to compute self diffusivities when the xtc trajectory file contains only a subset of atoms
Mark Abraham
- [gmx-users] How to compute self diffusivities when the xtc trajectory file contains only a subset of atoms
rocwhite168
- [gmx-users] How to compute self diffusivities when the xtc trajectory file contains only a subset of atoms
Mark Abraham
- [gmx-users] How to compute self diffusivities when the xtc trajectory file contains only a subset of atoms
rocwhite168
- [gmx-users] How to compute self diffusivities when the xtc trajectory file contains only a subset of atoms
Mark Abraham
- [gmx-users] How to compute self diffusivities when the xtc trajectory file contains only a subset of atoms
rocwhite168
- [gmx-users] How to mearg Ligand protein and Lipid
neha bharti
- [gmx-users] How to mearg Ligand protein and Lipid
Justin Lemkul
- [gmx-users] How to mearg Ligand protein and Lipid
RINU KHATTRI
- [gmx-users] How to mearg Ligand protein and Lipid
Justin Lemkul
- [gmx-users] How to rolled up a polymer chain
marcello cammarata
- [gmx-users] Hyper-threading Gromacs 5.0.1
Johnny Lu
- [gmx-users] Hyper-threading Gromacs 5.0.1
Johnny Lu
- [gmx-users] Hyper-threading Gromacs 5.0.1
Johnny Lu
- [gmx-users] Hyper-threading Gromacs 5.0.1
Johnny Lu
- [gmx-users] Hyper-threading Gromacs 5.0.1
Carsten Kutzner
- [gmx-users] Hyper-threading Gromacs 5.0.1
Mark Abraham
- [gmx-users] Hyper-threading Gromacs 5.0.1
Szilárd Páll
- [gmx-users] Hyper-threading Gromacs 5.0.1
Johnny Lu
- [gmx-users] Hyper-threading Gromacs 5.0.1
Johnny Lu
- [gmx-users] Hyper-threading Gromacs 5.0.1
Johnny Lu
- [gmx-users] Hyper-threading Gromacs 5.0.1
Johnny Lu
- [gmx-users] Hyper-threading Gromacs 5.0.1
Szilárd Páll
- [gmx-users] I: How to rolled up a polymer chain
marcello cammarata
- [gmx-users] I: How to rolled up a polymer chain
Justin Lemkul
- [gmx-users] I: How to rolled up a polymer chain
Mohd Farid Ismail
- [gmx-users] I: How to rolled up a polymer chain
marcello cammarata
- [gmx-users] I: How to rolled up a polymer chain
marcello cammarata
- [gmx-users] I: How to rolled up a polymer chain
Justin Lemkul
- [gmx-users] I: How to rolled up a polymer chain
Sathish Kumar
- [gmx-users] I: How to rolled up a polymer chain
Johnny Lu
- [gmx-users] I: How to rolled up a polymer chain
Johnny Lu
- [gmx-users] I: How to rolled up a polymer chain
marcello cammarata
- [gmx-users] I: How to rolled up a polymer chain
Dallas Warren
- [gmx-users] I: How to rolled up a polymer chain
Justin Lemkul
- [gmx-users] increasing forces during energy minimization
Ingo Appenzeller
- [gmx-users] increasing forces during energy minimization
Smith, Micholas D.
- [gmx-users] installation and running gromacs on windows
marcello cammarata
- [gmx-users] installation and running gromacs on windows
Mark Abraham
- [gmx-users] installation and running gromacs on windows
Mark Abraham
- [gmx-users] Installing gromacs 4.6.6 with gsl 1.16
B P
- [gmx-users] Installing gromacs 4.6.6 with gsl 1.16
Justin Lemkul
- [gmx-users] Installing gromacs 4.6.6 with gsl 1.16
B P
- [gmx-users] Integrator problem
Lovika Moudgil
- [gmx-users] Integrator problem
Mark Abraham
- [gmx-users] Integrator problem
Lovika Moudgil
- [gmx-users] interpretation of g_potential
soumadwip ghosh
- [gmx-users] itp file
Lovika Moudgil
- [gmx-users] itp file
Lalita Shaki
- [gmx-users] itp file
Lovika Moudgil
- [gmx-users] itp file
Justin Lemkul
- [gmx-users] itp file
Lovika Moudgil
- [gmx-users] Ligand Virtual Sites
Oliver Schillinger
- [gmx-users] Ligand Virtual Sites
Mark Abraham
- [gmx-users] Limitation on the maximum number of OpenMPI threads
Abhi Acharya
- [gmx-users] Limitation on the maximum number of OpenMPI threads
Mark Abraham
- [gmx-users] log file question
xiexiaobin at sjtu.edu.cn
- [gmx-users] make_ndx bug?
gromacs query
- [gmx-users] make_ndx bug?
Justin Lemkul
- [gmx-users] make_ndx bug?
gromacs query
- [gmx-users] make_ndx bug?
Justin Lemkul
- [gmx-users] make_ndx bug?
gromacs query
- [gmx-users] Making trajectory movie last longer.
Dawid das
- [gmx-users] Making trajectory movie last longer.
andrea
- [gmx-users] Making trajectory movie last longer.
Dawid das
- [gmx-users] Making trajectory movie last longer.
Johnny Lu
- [gmx-users] Making trajectory movie last longer.
Johnny Lu
- [gmx-users] Making trajectory movie last longer.
andrea
- [gmx-users] Martini force field - coarse grained protein tutorials
Tsjerk Wassenaar
- [gmx-users] Martini force field - coarse grained protein tutorials
Sridhar Kumar Kannam
- [gmx-users] Martini force field - coarse grained protein tutorials
Sridhar Kumar Kannam
- [gmx-users] MD analysis
Anu Chandran
- [gmx-users] MD analysis
Justin Lemkul
- [gmx-users] mean square displacement
Nidhi Katyal
- [gmx-users] mean-square displacement
ashhar khan
- [gmx-users] membrane protein simulation - errors
Yunlong Liu
- [gmx-users] membrane protein simulation - errors
Justin Lemkul
- [gmx-users] minimization for final configuration
Mahboobeh Eslami
- [gmx-users] minimization for final configuration
Justin Lemkul
- [gmx-users] minimization for final configuration
Dr. Vitaly Chaban
- [gmx-users] minimize the contribution from the reciprocal space in PME
Weilong Zhao
- [gmx-users] Mirror xtc-grp
Johnny Lu
- [gmx-users] Mirror xtc-grp
Johnny Lu
- [gmx-users] Modifying the protein chain in GROMACS
Tim Stauch
- [gmx-users] Modifying the protein chain in GROMACS
Justin Lemkul
- [gmx-users] Moving part # of -noappend
Johnny Lu
- [gmx-users] Moving part # of -noappend
Johnny Lu
- [gmx-users] Moving part # of -noappend
Justin Lemkul
- [gmx-users] mpi/openmp setup to avoid #1578 on 5.0
Johnny Lu
- [gmx-users] mpi/openmp setup to avoid #1578 on 5.0
Szilárd Páll
- [gmx-users] mpi/openmp setup to avoid #1578 on 5.0
Johnny Lu
- [gmx-users] Net charge density distribution plots in GROMACS
soumadwip ghosh
- [gmx-users] Net charge density distribution plots in GROMACS
João Henriques
- [gmx-users] Net charge density distribution plots in GROMACS
soumadwip ghosh
- [gmx-users] Net charge density distribution plots in GROMACS
João Henriques
- [gmx-users] ngmx removed in 5.0.1?
Kevin Chen
- [gmx-users] ngmx removed in 5.0.1?
Mark Abraham
- [gmx-users] no data read from file pdo.gz
Lyna Luo
- [gmx-users] no data read from file pdo.gz
Justin Lemkul
- [gmx-users] no data read from file pdo.gz
Lyna Luo
- [gmx-users] no data read from file pdo.gz
Justin Lemkul
- [gmx-users] non-bonded F kernel
xiexiaobin at sjtu.edu.cn
- [gmx-users] non-zero charge
Lovika Moudgil
- [gmx-users] non-zero charge
Indu Kumari
- [gmx-users] non-zero charge
Mark Abraham
- [gmx-users] non-zero charge
Justin Lemkul
- [gmx-users] non-zero charge
Lovika Moudgil
- [gmx-users] Obtaining coordinates of atoms from trajectory file.
Dawid das
- [gmx-users] Obtaining coordinates of atoms from trajectory file.
Justin Lemkul
- [gmx-users] On the ussing of different equilibration protocols in NPT
James Starlight
- [gmx-users] On the ussing of different equilibration protocols in NPT
James Starlight
- [gmx-users] On the ussing of different equilibration protocols in NPT
Justin Lemkul
- [gmx-users] On the ussing of different equilibration protocols in NPT
Justin Lemkul
- [gmx-users] On what scale will simulation with PME-dedicated nodes perform better?
Theodore Si
- [gmx-users] On what scale will simulation with PME-dedicated nodes perform better?
Mark Abraham
- [gmx-users] Over Clocking CPU on GROMACS
Nizar
- [gmx-users] overclocked cpu on gromacs
Nizar Masbukhin
- [gmx-users] PBC only on x and y in an NPT ensemble
Chrisostomos Batistakis
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Michael Carter
- [gmx-users] PBC problem in bilayer system
Michael Carter
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Justin Lemkul
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Justin Lemkul
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Justin Lemkul
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Justin Lemkul
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Justin Lemkul
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Justin Lemkul
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Justin Lemkul
- [gmx-users] PBC problem in bilayer system
Tsjerk Wassenaar
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Justin Lemkul
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Justin Lemkul
- [gmx-users] PBC problem in bilayer system
shahab shariati
- [gmx-users] PBC problem in bilayer system
Justin Lemkul
- [gmx-users] pbc=z, applying pbc only along the z-direction
Sridhar Kumar Kannam
- [gmx-users] performance 1 gpu
Johnny Lu
- [gmx-users] performance 1 gpu
Szilárd Páll
- [gmx-users] Performance of GTX 980 and 970
Pappu Kumar
- [gmx-users] Performance of GTX 980 and 970
Mirco Wahab
- [gmx-users] Performance of GTX 980 and 970
Szilárd Páll
- [gmx-users] Performance of GTX 980 and 970
Szilárd Páll
- [gmx-users] Performance of GTX 980 and 970
Pappu Kumar
- [gmx-users] Performance of GTX 980 and 970
Carsten Kutzner
- [gmx-users] Performance of GTX 980 and 970
Szilárd Páll
- [gmx-users] Performance of GTX 980 and 970
Szilárd Páll
- [gmx-users] performance question
Michael Brunsteiner
- [gmx-users] Performing MD simulations in presence of trivalent cations.
soumadwip ghosh
- [gmx-users] Performing MD simulations in presence of trivalent cations.
David van der Spoel
- [gmx-users] PME
kiana moghaddam
- [gmx-users] PME
Szilárd Páll
- [gmx-users] PME
Mark Abraham
- [gmx-users] Position restrain
Riccardo Concu
- [gmx-users] position restrains while pull simulation
shivangi nangia
- [gmx-users] position restrains while pull simulation
Tsjerk Wassenaar
- [gmx-users] position restrains while pull simulation
Justin Lemkul
- [gmx-users] position restrains while pull simulation
shivangi nangia
- [gmx-users] position restrains while pull simulation
Justin Lemkul
- [gmx-users] position restrains while pull simulation
shivangi nangia
- [gmx-users] position restrains while pull simulation
Justin Lemkul
- [gmx-users] position restrains while pull simulation
shivangi nangia
- [gmx-users] Postdoc Position Available
Dirar Homouz
- [gmx-users] potassium ion in GROMOS
h.alizadeh at znu.ac.ir
- [gmx-users] potassium ion in GROMOS
Justin Lemkul
- [gmx-users] precision of mixed precision
Johnny Lu
- [gmx-users] precision of mixed precision
Mark Abraham
- [gmx-users] Principal axes of inertia and g_principal
nicola staffolani
- [gmx-users] Principal axes of inertia and g_principal
Antonio Baptista
- [gmx-users] Principal axes of inertia and g_principal
nicola staffolani
- [gmx-users] Problem Compiling mdrun parallel version for GROMACS 4.5.6
Johnny Lu
- [gmx-users] Problem Compiling mdrun parallel version for GROMACS 4.5.6
Johnny Lu
- [gmx-users] Problem Compiling mdrun parallel version for GROMACS 4.5.6
Agnivo Gosai
- [gmx-users] Problem with constraints in NVT calculations.
Kester Wong
- [gmx-users] Problem with constraints in NVT calculations.
Justin Lemkul
- [gmx-users] Problem with gmx trjconv -box -1 -1 14
Stefano Borocci
- [gmx-users] Problem with gmx trjconv -box -1 -1 14
Mark Abraham
- [gmx-users] Problem with gmx trjconv -box -1 -1 14
Justin Lemkul
- [gmx-users] Problem with gmx trjconv -box -1 -1 14
Stefano Borocci
- [gmx-users] Problem with gmx trjconv -box -1 -1 14
Mark Abraham
- [gmx-users] Problem with gmx trjconv -box -1 -1 14
Stefano Borocci
- [gmx-users] Problem with gmx trjconv -box -1 -1 14
Stefano Borocci
- [gmx-users] Problem with: Shell particles are not implemented with domain de
Kester Wong
- [gmx-users] Problem with: Shell particles are not implemented with domain de
Kester Wong
- [gmx-users] Problem with: Shell particles are not implemented with domain de
Kester Wong
- [gmx-users] Problem with: Shell particles are not implemented with domain decomposition
Kester Wong
- [gmx-users] Problem with: Shell particles are not implemented with domain decomposition
Mark Abraham
- [gmx-users] Problem with: Shell particles are not implemented with domain decomposition
Justin Lemkul
- [gmx-users] Problem with: Shell particles are not implemented with domain decomposition
David van der Spoel
- [gmx-users] Problem with: Shell particles are not implemented with domain decomposition
Justin Lemkul
- [gmx-users] Problems installing Gromacs 5.0.1
Claudia Fernandes
- [gmx-users] Problems installing Gromacs 5.0.1
Mohd Farid Ismail
- [gmx-users] Problems installing Gromacs 5.0.1
Mark Abraham
- [gmx-users] Problems with the force field
jvissoto at fisica.ufpr.br
- [gmx-users] Problems with the force field
Terry
- [gmx-users] Problems with the force field
jvissoto at fisica.ufpr.br
- [gmx-users] process_top
Anton Feenstra
- [gmx-users] profiler
xiexiaobin at sjtu.edu.cn
- [gmx-users] profiler
Szilárd Páll
- [gmx-users] protein-ligand complex by gromacs
Mahboobeh Eslami
- [gmx-users] protein-ligand complex by gromacs
Justin Lemkul
- [gmx-users] protein-ligand complex by gromacs
lloyd riggs
- [gmx-users] QHA Entropy Error?
Daniel Margul
- [gmx-users] QM / MM assistance
Eric Smoll
- [gmx-users] QM / MM assistance
Johnny Lu
- [gmx-users] QM / MM assistance
Johnny Lu
- [gmx-users] QM / MM assistance
Eric Smoll
- [gmx-users] QM / MM assistance
Justin Lemkul
- [gmx-users] QM / MM assistance
Eric Smoll
- [gmx-users] Query regarding performance varies hugely in two similar systems
Mousumi Bhattacharyya
- [gmx-users] Query regarding the addition of solvent molecule
Christina Florina
- [gmx-users] Query regarding the addition of solvent molecule
Justin Lemkul
- [gmx-users] Query regarding the addition of solvent molecule
Christina Florina
- [gmx-users] Query regarding the addition of solvent molecule
Justin Lemkul
- [gmx-users] Query regarding the addition of solvent molecule
Christina Florina
- [gmx-users] Query regarding the addition of solvent molecule
Justin Lemkul
- [gmx-users] Query regarding the addition of solvent molecule
Christina Florina
- [gmx-users] Query regarding the addition of solvent molecule
Justin Lemkul
- [gmx-users] Query regarding the addition of solvent molecule
Christina Florina
- [gmx-users] Query regarding the addition of solvent molecule
Justin Lemkul
- [gmx-users] Query regarding the addition of solvent molecule
Christina Florina
- [gmx-users] Query regarding the addition of solvent molecule
Justin Lemkul
- [gmx-users] Question about n-linked glycans
Mikhail Yustanov
- [gmx-users] Question about n-linked glycans
bipin singh
- [gmx-users] Question about n-linked glycans
Justin Lemkul
- [gmx-users] Question about n-linked glycans
Laercio Pol Fachin
- [gmx-users] RDF analysis with respect to center of mass of Protein
Justin Lemkul
- [gmx-users] RDF analysis with respect to center of mass of rotein
Justin Lemkul
- [gmx-users] RDF analysis with respect to center of mass of otein
Carlos Navarro Retamal
- [gmx-users] RDF analysis with respect to center of mass of otein
Justin Lemkul
- [gmx-users] RDF analysis with respect to center of mass of otein
Carlos Navarro Retamal
- [gmx-users] RDF analysis with respect to center of mass of otein
Justin Lemkul
- [gmx-users] RDF analysis with respect to center of mass of otein
Carlos Navarro Retamal
- [gmx-users] RDF analysis with respect to center of mass of otein
Justin Lemkul
- [gmx-users] RDF analysis with respect to center of mass of otein
Marcelo Depólo
- [gmx-users] RDF analysis with respect to center of mass of otein
Carlos Navarro Retamal
- [gmx-users] RDF analysis with respect to center of mass of Protein
Carlos Navarro Retamal
- [gmx-users] RDF analysis with respect to center of mass of rotein
Carlos Navarro Retamal
- [gmx-users] Regarding error in grompp while running the tutorial of " KALP15 in DPPC "
Anurag Dobhal
- [gmx-users] Regarding error in grompp while running the tutorial of " KALP15 in DPPC "
Anurag Dobhal
- [gmx-users] Regarding error in grompp while running the tutorial of " KALP15 in DPPC "
Justin Lemkul
- [gmx-users] Regarding error in grompp while running the tutorial of " KALP15 in DPPC "
Anurag Dobhal
- [gmx-users] Regarding error in grompp while running the tutorial of " KALP15 in DPPC "
Justin Lemkul
- [gmx-users] Regarding gromacs installation
Sathya
- [gmx-users] Regarding gromacs installation
Chandan Choudhury
- [gmx-users] Regarding gromacs installation
Chandan Choudhury
- [gmx-users] Regarding gromacs installation
Dinesh Mali
- [gmx-users] regarding gromacs installation
Anurag Dobhal
- [gmx-users] regarding gromacs installation
Justin Lemkul
- [gmx-users] Regarding GROMACS Tutorial "KALP15 in DPPC"
Anurag Dobhal
- [gmx-users] Regarding GROMACS Tutorial "KALP15 in DPPC"
Anurag Dobhal
- [gmx-users] Regarding GROMACS Tutorial "KALP15 in DPPC"
Anurag Dobhal
- [gmx-users] Regarding GROMACS Tutorial "KALP15 in DPPC"
Justin Lemkul
- [gmx-users] Regarding GROMACS Tutorial "KALP15 in DPPC"
Anurag Dobhal
- [gmx-users] Regarding GROMACS Tutorial "KALP15 in DPPC"
Justin Lemkul
- [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
Anurag Dobhal
- [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
Justin Lemkul
- [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
Anurag Dobhal
- [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
Justin Lemkul
- [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
Anurag Dobhal
- [gmx-users] regarding GROMACS Tutorial KALP15 in DPPC
Justin Lemkul
- [gmx-users] Regarding siRNA simulation.
Anurag Dobhal
- [gmx-users] Regarding siRNA simulation.
Justin Lemkul
- [gmx-users] Regarding Umbrella samplling
Sathish Kumar
- [gmx-users] Regarding Umbrella samplling
Justin Lemkul
- [gmx-users] Regargding simulation of periodic silica surface
Sathish Kumar
- [gmx-users] Regargding simulation of periodic silica surface
Mirco Wahab
- [gmx-users] Regargding simulation of periodic silica surface
Mirco Wahab
- [gmx-users] Regargding simulation of periodic silica surface
Mirco Wahab
- [gmx-users] Regargding simulation of periodic silica surface
Sathish Kumar
- [gmx-users] Regargding simulation of periodic silica surface
Mirco Wahab
- [gmx-users] Reminder about Gromacs user survey
Michael Shirts
- [gmx-users] Request for return of PDF containing all the commands, with help
Dallas Warren
- [gmx-users] Request for return of PDF containing all the commands, with help
Justin Lemkul
- [gmx-users] Request for return of PDF containing all the commands, with help
Mark Abraham
- [gmx-users] Request for return of PDF containing all the commands, with help
Dallas Warren
- [gmx-users] Restart Arbitrary Frame & Thermostat.
Johnny Lu
- [gmx-users] Restart Arbitrary Frame & Thermostat.
Mark Abraham
- [gmx-users] Restart Arbitrary Frame & Thermostat.
Johnny Lu
- [gmx-users] Restart Arbitrary Frame & Thermostat.
Mark Abraham
- [gmx-users] Restart Arbitrary Frame & Thermostat.
Johnny Lu
- [gmx-users] Restart Arbitrary Frame & Thermostat.
Johnny Lu
- [gmx-users] Restart Arbitrary Frame & Thermostat.
Mark Abraham
- [gmx-users] Running Free enrgy simulation for ionic molecules
vivek sharma
- [gmx-users] Segmentation fault mdrun
Alex s
- [gmx-users] Segmentation fault mdrun
Mark Abraham
- [gmx-users] sequence of atoms different for rmsd reference structure
Tsjerk Wassenaar
- [gmx-users] sequence of atoms different for rmsd reference structure
gromacs query
- [gmx-users] Some Scaling of 5.0 Results
Dallas Warren
- [gmx-users] Some Scaling of 5.0 Results
Mark Abraham
- [gmx-users] Some Scaling of 5.0 Results
Szilárd Páll
- [gmx-users] Some Scaling of 5.0 Results
Dallas Warren
- [gmx-users] Some Scaling of 5.0 Results
Dallas Warren
- [gmx-users] Some Scaling of 5.0 Results
Mark Abraham
- [gmx-users] Spherical Position Restrain from the center of the Box
#ZHANG HAIPING#
- [gmx-users] Status of MD simulation
ankit agrawal
- [gmx-users] Status of MD simulation
Mark Abraham
- [gmx-users] Status of MD simulation
Lovika Moudgil
- [gmx-users] strange behaviour of gmx solvent with non standard solvent
Sridhar Kumar Kannam
- [gmx-users] Structuring as function of z - gmx order
Dallas Warren
- [gmx-users] Structuring as function of z - gmx order
Dallas Warren
- [gmx-users] Structuring as function of z - gmx order
Dallas Warren
- [gmx-users] tab completion gmx
Viveca Lindahl
- [gmx-users] tab completion gmx
Mark Abraham
- [gmx-users] tab completion gmx
Viveca Lindahl
- [gmx-users] tab completion gmx
Mark Abraham
- [gmx-users] talk page on gromacs wiki
Johnny Lu
- [gmx-users] talk page on gromacs wiki
Mark Abraham
- [gmx-users] talk page on gromacs wiki
Johnny Lu
- [gmx-users] Temperature coupling of two-phase system
朱文鹏
- [gmx-users] Temperature coupling of two-phase system
Erik Marklund
- [gmx-users] template.c is needed for Gromacs 5.0
Bert
- [gmx-users] template.c is needed for Gromacs 5.0
Mark Abraham
- [gmx-users] the average structure in pdb format
Mahboobeh Eslami
- [gmx-users] the growth of the molecule
Александр Селютин
- [gmx-users] the growth of the molecule
Smith, Micholas D.
- [gmx-users] the growth of the molecule
Dr. Vitaly Chaban
- [gmx-users] the growth of the molecule
Smith, Micholas D.
- [gmx-users] the growth of the molecule
Tamas Karpati
- [gmx-users] the growth of the molecule
Александр Селютин
- [gmx-users] the growth of the molecule
Justin Lemkul
- [gmx-users] the growth of the molecule
Rasoul Nasiri
- [gmx-users] the growth of the molecule
Jakub Krajniak
- [gmx-users] TIGER2 implementation in GROMACS
João Henriques
- [gmx-users] TIGER2 implementation in GROMACS
Mark Abraham
- [gmx-users] TIGER2 implementation in GROMACS
João Henriques
- [gmx-users] TIGER2 implementation in GROMACS
João M. Damas
- [gmx-users] trjconv -s
xy21hb
- [gmx-users] trjconv -s
Mark Abraham
- [gmx-users] trjconv -s
xy21hb
- [gmx-users] trjconv -s
Chandan Choudhury
- [gmx-users] trjconv -s
Samuel Bowerman
- [gmx-users] trjconv -s
xy21hb
- [gmx-users] trjconv -s
Samuel Bowerman
- [gmx-users] trjconv pbc options
pratibha kapoor
- [gmx-users] trjconv pbc options
Justin Lemkul
- [gmx-users] trjconv pbc options
Tsjerk Wassenaar
- [gmx-users] trjconv pbc options
RINU KHATTRI
- [gmx-users] trjconv pbc options
Tsjerk Wassenaar
- [gmx-users] two new releases of PLUMED
Carlo Camilloni
- [gmx-users] umbrella sampling
susanta haldar
- [gmx-users] umbrella sampling
Erik Marklund
- [gmx-users] Umbrella samplling
Sathish Kumar
- [gmx-users] Umbrella samplling
Justin Lemkul
- [gmx-users] undefined symbol: TMPI_BYTE
Chandan Choudhury
- [gmx-users] undefined symbol: TMPI_BYTE
Mark Abraham
- [gmx-users] undefined symbol: TMPI_BYTE
Chandan Choudhury
- [gmx-users] undefined symbol: TMPI_BYTE
Szilárd Páll
- [gmx-users] Unit/Regression Testing on Xeon Phi?
Paul Caheny
- [gmx-users] Unrealistic behaviour of water on graphene [NVT]
Kester Wong
- [gmx-users] Unrealistic behaviour of water on graphene [NVT]
Tsjerk Wassenaar
- [gmx-users] Unrealistic behaviour of water on graphene [NVT]
Kester Wong
- [gmx-users] use of " -t nvt.cpt" option in NPT equilibration
Ansuman Biswas
- [gmx-users] use of " -t nvt.cpt" option in NPT equilibration
R.S.K.Vijayan
- [gmx-users] use of " -t nvt.cpt" option in NPT equilibration
Justin Lemkul
- [gmx-users] use of " -t nvt.cpt" option in NPT equilibration
Tsjerk Wassenaar
- [gmx-users] Using a 4.6.5 cpt file in 5.0 to extend a run?
Nathan Scott
- [gmx-users] Using a 4.6.5 cpt file in 5.0 to extend a run?
Mark Abraham
- [gmx-users] Using a 4.6.5 cpt file in 5.0 to extend a run?
Nathan Scott
- [gmx-users] Using a 4.6.5 cpt file in 5.0 to extend a run?
Johnny Lu
- [gmx-users] Using a 4.6.5 cpt file in 5.0 to extend a run?
Mark Abraham
- [gmx-users] Using GROMACS to find the net charge on a Protein
Agnivo Gosai
- [gmx-users] Using GROMACS to find the net charge on a Protein
Justin Lemkul
- [gmx-users] Using GROMACS to find the net charge on a Protein
João Henriques
- [gmx-users] Using GROMACS to find the net charge on a Protein
donna at iflysib.unlp.edu.ar
- [gmx-users] using the pull code to constrain the COM of every molecule in a system
Nicholas J. Dunn
- [gmx-users] watrebox with osmolites
niyaz.sabir
- [gmx-users] watrebox with osmolites
Justin Lemkul
- [gmx-users] watrebox with osmolites
niyaz.sabir
- [gmx-users] What does PHE(OL) mean?
Johnny Lu
- [gmx-users] which item is gpu wait for cpu?
xiexiaobin at sjtu.edu.cn
- [gmx-users] which item is gpu wait for cpu?
Szilárd Páll
- [gmx-users] which item is gpu wait for cpu?
xiexiaobin at sjtu.edu.cn
- [gmx-users] which item is gpu wait for cpu?
xiexiaobin at sjtu.edu.cn
- [gmx-users] which item is gpu wait for cpu?
Mark Abraham
- [gmx-users] which item is gpu wait for cpu?
Theodore Si
- [gmx-users] which item is gpu wait for cpu?
Mark Abraham
- [gmx-users] Why compute capability > or = 2.0??
B P
- [gmx-users] Why compute capability > or = 2.0??
Mark Abraham
- [gmx-users] Why compute capability > or = 2.0??
Szilárd Páll
- [gmx-users] Отв: Отв: GROM (.mdp, .itp, .top) and .pdb Editor with Syntax Highlighting
Hovakim Grabski
- [gmx-users] 答复: membrane protein simulation - errors
Yunlong Liu
- [gmx-users] 答复: membrane protein simulation - errors
Justin Lemkul
Last message date:
Tue Sep 30 23:40:03 CEST 2014
Archived on: Tue Sep 30 23:40:05 CEST 2014
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