[gmx-users] Add missing residue

Mark Abraham mark.j.abraham at gmail.com
Sun Sep 28 16:46:00 CEST 2014


Hi,

There are some suggestions at
http://www.gromacs.org/Documentation/File_Formats/Coordinate_File

Mark

On Sun, Sep 28, 2014 at 4:35 PM, Nizar Masbukhin <nizar.fkub08 at gmail.com>
wrote:

> Dear users,
>
> I'm going to simulate a protein. On the pdb file contents, it's said that
> this protein has two chains, and missing residues and atoms. when I try to
> pdb2gmx, the error messages occured. It seemed due tue the missing residue
> so that i got the message error.
> My question is: How can I add missing resiudes and atoms to the pdb files
> so that i can use it?
>
> Thanks
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