[gmx-users] there wasn't md_0_1.xtc file
dehghanmarzieh at gmail.com
Sat Apr 4 19:45:57 CEST 2015
Hi every body
after creating a covalent bond, I ran output file based on GROMACS tutorial
(Lysozyme in water) and applied the following command " mdrun -deffnm
md_0_1". at the end of 1ns, I achieved the following output files:
but unfortunatelly there wasn't md_0_1.xtc file.
please let me know how can I calculate distance, RMSD or RMSF because they
need to have md_0_1.xtc ?
I am looking forward to getting your nice answer
*Marzieh DehghanPhD Candidate of BiochemistryInstitute of biochemistry and
Biophysics (IBB)University of Tehran, Tehran- Iran.*
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