[gmx-users] Fatal error: Atom type Zn2+ (residue ZN) not found in atomtype database

Anurag Dobhal anurag.dobhal at nano-medicine.co.in
Thu Apr 9 15:23:36 CEST 2015

Dear all

I am running pdb2gmx to creat the topology file of my structure,
But I did get the error

Fatal error:
Atom type Zn2+ (residue ZN) not found in atomtype database

Although my .pdb file does not contain Atom type Zn2+ (residue ZN)

*Anurag DobhalJuniour Research fellowSupervisor: Dr. Ratnesh D.
JainDepartment of chemical engineeringInsttute of Chemical
Technology400019, +91 8898486877*



*This communication is intended only for the person or entity to which it 
is addressed and may contain confidential and / or privileged material. Any 
review, retransmission, dissemination or other use is prohibited. If you 
have received this in error, please contact the sender and delete this 
material from your computer. Kindly note that this mail does not constitute 
an offer or solicitation for the purchase or sale of any financial 
instrument or as an official confirmation of any transaction. The 
information is not warranted as to completeness or accuracy and is subject 
to change without notice. Any comments or statements made herein do not 
necessarily reflect those of Nanomedicine Research Group.  Before opening 
the email or accessing any attachments, please check and scan for virus.*

More information about the gromacs.org_gmx-users mailing list