[gmx-users] About Analsysi tool

[vidhya sankar]

Dear Justin Thank you for your previous reply,                                                                         I am doing Dynamics for CNT-wraapped by Cyclic peptide .  The Cyclic peptide i am stacking Beyond Hydrogen bond distance.  AT end of Simulation, the Assembly become Collapsed 
Is there is Any tool To list out  interaction energy  and  analyze  the interaction energy (may be decomposing during simulation) between Cyclic peptides and Between Cyclic peptides Vs CNT

Thanks in Advance 
S.Vidhyasankar