[gmx-users] Number Error in XTC file

Jennifer Vo quyviolet at gmail.com
Tue Apr 28 16:33:59 CEST 2015


Dear Mark,
Many thanks for your answer. Is there anyway to overcome this?
Regards,
Jennifer

On Tue, Apr 28, 2015 at 4:26 PM, Mark Abraham <mark.j.abraham at gmail.com>
wrote:

> Hi,
>
> Typically that means you're reading a trajectory of size > 2GB on a
> filesystem that can't do that (e.g. a 32-bit one).
>
> Mark
>
> On Tue, Apr 28, 2015 at 4:20 PM Jennifer Vo <quyviolet at gmail.com> wrote:
>
> > Dear All,
> > I have got the error in the end of trajectory converting: "Magic Number
> > Error in XTC file (read -335790888, should be 1995)"
> >
> > trjconv -s md-1.tpr -f md-300ns-wat.xtc -o md_CA.pdb -n index_8pro.ndx
> -pbc
> > mol -ur compact -center -skip 1000
> >
> >
> > Is there anybody know what`s the error about?
> > Many thanks in advance.
> > Jennifer
> > --
> > Gromacs Users mailing list
> >
> > * Please search the archive at
> > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> > posting!
> >
> > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> >
> > * For (un)subscribe requests visit
> > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> > send a mail to gmx-users-request at gromacs.org.
> >
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>


More information about the gromacs.org_gmx-users mailing list