[gmx-users] Problem compiling Gromacs 5.1

[岡部篤俊]

Thanks, Peter. 
But , I mean I don’t know what line I should change to from line 52 of cmake/FindPhinx.cmake to solve this error.

Leucer

2015/08/20 16:02、Kroon, P.C. <p.c.kroon at rug.nl> のメール：

> Just use your favourite text editor.
> 
> Peter
> 
> On Thu, Aug 20, 2015 at 3:10 AM, <atsutoshi0708 at gmail.com> wrote:
> 
>> Line 52 of cmake/FindSphinx.cmake file is written below.
>> string(REGEX REPLACE "Sphinx \\([^)]*\\) ([^ ]+)" "\\1"
>> SPHINX_EXECUTABLE_VERSION "${SPHINX_VERSION_OUTPUT_VARIABLE}")
>> 
>> Can you tell me how I can change the line?
>> 
>> Bests,
>> Leucer
>> 
>> 
>> 2015/08/19 23:11、Mark Abraham <mark.j.abraham at gmail.com> のメッセージ:
>> 
>>> Hi,
>>>> On Wed, Aug 19, 2015 at 3:49 PM 岡部篤俊 <atsutoshi0708 at gmail.com> wrote:
>>>> 
>>>> Hi,
>>>> 
>>>> I am unable to  compile Gromamcs 5.1 using the following cmake command.
>>>> cmake .. -DGMX_FFT_LIBRARY=fftpack
>>>> -DCMAKE_INSTALL_PREFIX=gromacs/gromacs-5.1 -DGMX_DOUBLE=off
>>>> -DGMX_THREAD_MPI=off -DGMX_MPI=on -DGMX_CPU_ACCELERATION=SSE4.1
>>> 
>>> 
>>> Unrelated, but you now need to use -DGMX_SIMD=SSE4.1 to have the same
>>> effect.
>>> 
>>> 
>>>> -DGMX_USE_RDTSCP=off
>>>> 
>>>> Then I got the error message.
>>>> Boost >= 1.44 not found. Using minimal internal version. This may cause
>>>> trouble if you plan on compiling/linking other software that uses Boost
>>>> against GROMACS.
>>>> CMake Error at cmake/FindSphinx.cmake:52 (string):
>>>> string sub-command REGEX, mode REPLACE needs at least 6 arguments total
>>>> to
>>>> command.
>>>> Call Stack (most recent call first):
>>>> docs/CMakeLists.txt:62 (find_package)
>>>> 
>>>> Could you advice what could be causing this error?
>>> 
>>> We try to find Sphinx in case people want to build the new documentation,
>>> but it looks like some part of the detection isn't reliable enough. Can
>> you
>>> please try changing line 52 of cmake/FindSphinx.cmake to read
>>> 
>>>   string(REGEX REPLACE "Sphinx \\([^)]*\\) ([^ ]+)" "\\1"
>>> SPHINX_EXECUTABLE_VERSION "${SPHINX_VERSION_OUTPUT_VARIABLE}")
>>> 
>>> and let us know how you go?
>>> 
>>> Mark
>>> 
>>> I was able to compile Gromacs 5.0 using same cmake command….
>>>> 
>>>> Bests,
>>>> Leucer
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