[gmx-users] Extending simulations
Mark Abraham
mark.j.abraham at gmail.com
Mon Dec 21 06:29:58 CET 2015
Hi,
Sounds like you haven't used the .tpr you think you are using. (But if your
production simulations require the use of -maxwarn 5, then you probably
have much bigger problems...)
Mark
On Mon, Dec 21, 2015 at 2:32 PM Soumya Lipsa Rath <soumyalipsabt at gmail.com>
wrote:
> Dear Gromacs users,
>
> I am trying to extend my simulation for 200ns by using:
>
> tpbconv_mpi -s topol.tpr -extend 200000 -o topol2.tpr
> mdrun_mpi -s topol2.tpr -cpi state.cpt -append -maxwarn 5 >&
> grompp_output.log
>
> However, my simulation has only extended for 50ns. Am I doing something
> wrong?
>
> Thanks,
>
> Soumya
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