[gmx-users] Question about biphasic tutorial

[James Lord]

Hi Justin,
Welcome back. Thanks I solved it the other day. I got the coordinate and
topology.
Cheers
James

On Monday, July 27, 2015, Justin Lemkul <jalemkul at vt.edu> wrote:

>
>
> On 7/24/15 4:16 AM, James Lord wrote:
>
>> Hi all,
>> I want to make the the hydrophobic layer Justin has made but only have one
>> .itp file from ATB for the hydrophobic layer (no topology and coordinate)?
>> Any suggestion where and how to start to make this  hydrophobic layer? I
>> am
>> aware of what Justin has suggested regarding using PRODRG
>> <http://davapc1.bioch.dundee.ac.uk/cgi-bin/prodrg>,. any comments?
>>
>
> I really don't understand what you're asking.  Can you explain your
> intended process in more detail?
>
> -Justin
>
> --
> ==================================================
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> Justin A. Lemkul, Ph.D.
> Ruth L. Kirschstein NRSA Postdoctoral Fellow
>
> Department of Pharmaceutical Sciences
> School of Pharmacy
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> University of Maryland, Baltimore
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>
> jalemkul at outerbanks.umaryland.edu | (410) 706-7441
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