[gmx-users] joining line in rms

Terry terrencesun at gmail.com
Fri Jun 26 04:03:28 CEST 2015


Hi,

Though it's not Gromacs related, it seems like you put two set of data into
one (e.g. joining two sets of RMSf in one file). If this is the case put
them in two files or in two columns of the same file and using -nxy option
(assuming you're using Grace). Anyway, consulting manual of your plot
software is the way to go.

Cheers
Terry


On Sat, Jun 20, 2015 at 11:43 AM, Debajyoti Dutta <
debajyoti_dutta47 at rediffmail.com> wrote:

> Hi all,
>
> I have been running a dimer in simulation in GROMACS opls/aa, after that I
> am getting a joining line in the rms fluctuation.
>
> anyone please help me for that. chains are separated by A and B
> nomenclature
>
> Please find the plot in the following link
>
>
> https://drive.google.com/file/d/0B7TB1kZSaF9zRFd0R0djbmhQLTg/view?usp=sharing
>
>
> Thanks in advance
>
> Debajyoti
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