[gmx-users] high temperature
mah maz
mahmaz71 at gmail.com
Sun Mar 1 08:46:15 CET 2015
Dear all,
I have a CNT system. I have set the mdp file as follows, but the
temperature output is logically more than what I expected even in the
production step(around 500k). I have changed the mdp file several times but
it doesn't work. What are the possible causes of problem?
Thank you!
dt = 0.0001
tinit = 0
nsteps = 2000000
nstxout = 1000
nstvout = 1000
nstfout = 0
nstlog = 1000
nstenergy = 1000
nstlist = 5
ns_type = grid
rlist = 0.9
coulombtype = cut-off
rcoulomb = 0.9
rvdw = 0.9
rvdw_switch = 0.5
vdwtype = switch
pbc = no
integrator = md-vv
Tcoupl = nose-hoover
tau_t = 0.1
ref_t = 300
tc_grps = CNT
gen_temp = 300
pcoupl = no
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