[gmx-users] Triclinic box output error

[Sevasteiadis, Michail]

Hello,

I run a short-time simulation of a liquid on a crystal surface using triclinic box PBC but when it finishes it returns the Y side of the crystal in right angle(like cutting it in right angle) while it retains the X and Z angles. When checking the pbc box in VMD it's not changed and shows half of the Y side out of the box. Any ideas?

Thank you,
Michail