[gmx-users] Error while using pbc = xy Segmentation fault (core dumped)
Tushar Ranjan Moharana
tusharranjanmoharana at gmail.com
Sun Mar 29 09:13:51 CEST 2015
Hi everyone,
I want to use PBC only in xy direction but get error "Segmentation fault
(core dumped)" during energy minimization. I am using CHARM36 force field
and my .mdp file is
integrator = steep
emtol = 1000.0
emstep = 0.01
nsteps = 50000
nstlist = 20
cutoff-scheme = Verlet
ns_type = grid
coulombtype = cut-off
rcoulomb = 1.2
rvdw = 1.2
pbc = xy
nwall = 2
wall-type = 10-4
wall-atomtype = CR CR
wall-density = 5 5
ewald-geometry = 3dc
Everything is fine when using pbc = xyz and removing subsequent line.
Please help me in solving the problem. Thanks a lot.
--
Tushar Ranjan Moharana
B. Tech, NIT Warangal
Ph D Student, CCMB
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