[gmx-users] CPU running doesn't match command line
Albert
mailmd2011 at gmail.com
Tue Aug 16 15:55:50 CEST 2016
Hello:
I submitted two Gromacs GPU MD simulation to the same GPU machine with
the identical command line:
gmx_mpi mdrun -s 7.tpr -v -g 7.log -c 7.gro -x 7.xtc -ntomp 8 -gpu_id 0
-pin on >& 7.info
gmx_mpi mdrun -s 7.tpr -v -g 7.log -c 7.gro -x 7.xtc -ntomp 8 -gpu_id 1
-pin on >& 7.info
In principle, there should be 16 CPU in all were occupied by these two
jobs. However, I found that (by command htop) there are only actually 8
CPU using, although it created 16 thread job..... I am just wondering
what's happening? If I only submit one job, 8 CPU are occupied.
Thank you very much.
Albert
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