[gmx-users] unknown bond atom_type +

[Mark Abraham]

Hi,

Does the future version of the error message suggest a line number for you
to look at?

Mark

On Tue, 23 Aug 2016 23:11 SAKO MIRZAIE <sako.biochem at gmail.com> wrote:

> Dear All,
>
> I am trying to do vacuum md on a huge polymer, f-127. I had to add sex
> residues to rtp file, but with know atom types. now, when I run the
> grompp, I got the following error:
>
> "unknown bond atom_type +"
>
> I checked my topology file and I have no any atom named "+". I don't
> know what does it mean. any help is appreciated.
>
> best regards
>
> --
> ***********************************************
> Sako Mirzaie
> PhD in biochemistry, Assistant Professor, science faculty,  Azad
> university of
> Sanandaj, Sanandaj, Iran
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