[gmx-users] multi node processing issue

[abhisek Mondal]

Hi,

I'm having a hard time running a npt equilibration code with 2 nodes (32
cores). The command I'm using is:
mpirun -np 32 -machinefile  nodes /app/grommacs507/bin/gmx_mpi mdrun
-tunepme -dlb auto -gcom 10 -v -deffnm npt


But this code runs on 32 cores for sometime then  keeps running on 2-4
cores.

If you please debug me here.

thanks.

-- 
Abhisek Mondal

*Research Fellow*

*Structural Biology and Bioinformatics Division*
*CSIR-Indian Institute of Chemical Biology*

*Kolkata 700032*

*INDIA*