December 2016 Archives by subject

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Starting: Thu Dec 1 04:22:52 CET 2016
Ending: Fri Dec 30 17:58:21 CET 2016
Messages: 439

[gmx-users] (no subject) Gregory Man Kai Poon
[gmx-users] (no subject) Justin Lemkul
[gmx-users] (no subject) SA
[gmx-users] 2016.1 : BUG 'gmx wham' option '-nt' not recognized Walter K Vogel
[gmx-users] 2016.1 : BUG 'gmx wham' option '-nt' not recognized Mark Abraham
[gmx-users] 2016.1 : BUG 'gmx wham' option '-nt' not recognized Walter K Vogel
[gmx-users] About negative values deuterium order parameters Poncho Arvayo Zatarain
[gmx-users] About negative values deuterium order parameters Justin Lemkul
[gmx-users] About surface in GROMACS Faust SHI
[gmx-users] About surface in GROMACS Mark Abraham
[gmx-users] Adding external field to selected atoms Bappa Ghosh
[gmx-users] Adding external field to selected atoms Mark Abraham
[gmx-users] adding lcudart C++ flag + -cudart=shared NVCC flag to compile option Rizki Bayu
[gmx-users] adding lcudart C++ flag + -cudart=shared NVCC flag to compile option Mark Abraham
[gmx-users] adding new parameters to force field Mohsen Ramezanpour
[gmx-users] adding new parameters to force field Mark Abraham
[gmx-users] adding new parameters to force field Mohsen Ramezanpour
[gmx-users] all electron force field Maryam Kowsar
[gmx-users] Analaysis ‪Mohammad Roostaie‬ ‪
[gmx-users] Analaysis Justin Lemkul
[gmx-users] Analaysis Amir Zeb
[gmx-users] Analaysis ‪Mohammad Roostaie‬ ‪
[gmx-users] Analaysis ‪Mohammad Roostaie‬ ‪
[gmx-users] autocorrelation function faride badalkhani
[gmx-users] Backmapping from MARTINI to AA in GROMACS 5.1.1: initram.sh error SRINIVAS MUSHNOORI
[gmx-users] bash: /home/linux/installation/gromacs/bin/gmx_mpi: cannot execute binary file Andrew Bostick
[gmx-users] bash: /home/linux/installation/gromacs/bin/gmx_mpi: cannot execute binary file Mark Abraham
[gmx-users] Basic questions qasimpars at gmail.com
[gmx-users] Basic questions Justin Lemkul
[gmx-users] Block calculation Kelsy Yuan
[gmx-users] Block calculation Justin Lemkul
[gmx-users] Building using FFTW3 for FFT and MKL for BLAS/LAPACK Will Furnass
[gmx-users] Building using FFTW3 for FFT and MKL for BLAS/LAPACK Mark Abraham
[gmx-users] Calculating osmotic coefficient through virial/kinetic terms: what is the handy way? Vries, de, H.W.
[gmx-users] calculating the RDF of the molecular center of mass with GROMACS 2016-beta2 yamashita.ryoto.82s at st.kyoto-u.ac.jp
[gmx-users] CG Lincs errors Nash, Anthony
[gmx-users] CG Lincs errors Mark Abraham
[gmx-users] CG Lincs errors Alex
[gmx-users] CG Lincs errors Nash, Anthony
[gmx-users] CG Lincs errors Peter Kroon
[gmx-users] CG Lincs errors Nash, Anthony
[gmx-users] CG-MD to study the conformational changes of proteins... Quyen V. Vu
[gmx-users] CG-MD to study the conformational changes of proteins... Dariush Mohammadyani
[gmx-users] CG-MD to study the conformational changes of proteins... Shanmuga Priya V.G
[gmx-users] CG-MD to study the conformational changes of proteins... Nikhil Maroli
[gmx-users] Character issues Kelsy Yuan
[gmx-users] Character issues Mark Abraham
[gmx-users] Character issues Kelsy Yuan
[gmx-users] Character issues Mark Abraham
[gmx-users] Character issues Kelsy Yuan
[gmx-users] Character issues Mark Abraham
[gmx-users] Character issues Justin Lemkul
[gmx-users] Character issues Kelsy Yuan
[gmx-users] Character issues Justin Lemkul
[gmx-users] Charge Correction using HF method tasneem kausar
[gmx-users] Charge Correction using HF method Justin Lemkul
[gmx-users] Charge on drug tasneem kausar
[gmx-users] Charge on drug Mark Abraham
[gmx-users] Charge on drug tasneem kausar
[gmx-users] Charge on drug tasneem kausar
[gmx-users] Charge on drug Justin Lemkul
[gmx-users] Charge on drug tasneem kausar
[gmx-users] Charge on drug Justin Lemkul
[gmx-users] Charge on drug tasneem kausar
[gmx-users] Charged systems #SUKRITI GUPTA#
[gmx-users] Charged systems #SUKRITI GUPTA#
[gmx-users] Charged systems Philip Loche
[gmx-users] Clustsize error Amir Zeb
[gmx-users] COM group of Membrane and Protein simulation Mijiddorj Batsaikhan
[gmx-users] COM group of Membrane and Protein simulation Justin Lemkul
[gmx-users] COM group of Membrane and Protein simulation Mijiddorj Batsaikhan
[gmx-users] COM group of Membrane and Protein simulation Mijiddorj Batsaikhan
[gmx-users] COM group of Membrane and Protein simulation Justin Lemkul
[gmx-users] COM group of Membrane and Protein simulation Mijiddorj Batsaikhan
[gmx-users] COM Pull energy in v. 2016.1 Alex
[gmx-users] COM Pull energy in v. 2016.1 Alex
[gmx-users] Compress the box Faust SHI
[gmx-users] Computer processor and graphics card choice Guillem Prats Ejarque
[gmx-users] Computer processor and graphics card choice Andrew Guy
[gmx-users] Computer processor and graphics card choice Peter Kroon
[gmx-users] Computer processor and graphics card choice T.M.D. Graen
[gmx-users] Computer processor and graphics card choice Szilárd Páll
[gmx-users] Computer processor and graphics card choice Szilárd Páll
[gmx-users] Computer processor and graphics card choice Guillem Prats Ejarque
[gmx-users] constraint NIKHIL JOSHI
[gmx-users] constraint Mark Abraham
[gmx-users] constraint NIKHIL JOSHI
[gmx-users] Continuing a FEP alchemical Alex
[gmx-users] Continuing a FEP alchemical Hannes Loeffler
[gmx-users] Continuing a FEP alchemical Alex
[gmx-users] Continuing a FEP alchemical Hannes Loeffler
[gmx-users] correction of pmf profile due to entropic decrease Alex
[gmx-users] correction of pmf profile due to entropic decrease Alex
[gmx-users] correction of pmf profile due to entropic decrease Erik Marklund
[gmx-users] Cosine bending potential ARNAB MUKHERJEE
[gmx-users] Cosine bending potential Mark Abraham
[gmx-users] Crosslinking of polymers Mishelle Oña
[gmx-users] Crosslinking of polymers Justin Lemkul
[gmx-users] Defining +/- in the RTP file for a molecule with 3 different molecules Aishwary Shivgan
[gmx-users] Defining +/- in the RTP file for a molecule with 3 different molecules Justin Lemkul
[gmx-users] Defining +/- in the RTP file for a molecule with 3 different molecules Aishwary Shivgan
[gmx-users] Defining +/- in the RTP file for a molecule with 3 different molecules Justin Lemkul
[gmx-users] Defining +/- in the RTP file for a molecule with 3 different molecules Aishwary Shivgan
[gmx-users] Defining +/- in the RTP file for a molecule with 3 different molecules Justin Lemkul
[gmx-users] Deletion of Lipids During InflateGro? Sanim Rahman
[gmx-users] Deletion of Lipids During InflateGro? Justin Lemkul
[gmx-users] Desired spacing in umbrella sampling faride badalkhani
[gmx-users] desmond setup maria khan
[gmx-users] desmond setup Sotirios Dionysios I. Papadatos
[gmx-users] Desolvation or hydration free energy of an ION Alex
[gmx-users] Desolvation or hydration free energy of an ION Justin Lemkul
[gmx-users] Desolvation or hydration free energy of an ION Alex
[gmx-users] Desolvation or hydration free energy of an ION Justin Lemkul
[gmx-users] Dihedral calculations in topology Kamps, M.
[gmx-users] Dihedral calculations in topology Mark Abraham
[gmx-users] Dihedral calculations in topology Kamps, M.
[gmx-users] Dihedral calculations in topology Mark Abraham
[gmx-users] Dihedral calculations in topology Kamps, M.
[gmx-users] Dihedral calculations in topology Justin Lemkul
[gmx-users] Dihedral calculations in topology Justin Lemkul
[gmx-users] DMSO Hoda Alibiglou
[gmx-users] DMSO tasneem kausar
[gmx-users] DMSO Mark Abraham
[gmx-users] Energy conservation in NVE Michael Gilson
[gmx-users] Energy conservation in NVE Mark Abraham
[gmx-users] Energy conservation in NVE simulations Michael K. Gilson
[gmx-users] Energy conservation in NVE simulations Justin Lemkul
[gmx-users] Energy group exclusions #SUKRITI GUPTA#
[gmx-users] Energy group exclusions Mark Abraham
[gmx-users] Energy group exclusions Mark Abraham
[gmx-users] Energy group exclusions #SUKRITI GUPTA#
[gmx-users] Energy minimization steps Syed Azeem
[gmx-users] Energy minimization steps Alex
[gmx-users] Energy minimization steps Alex
[gmx-users] Energy minimization steps Mark Abraham
[gmx-users] Energy minimization steps Syed Azeem
[gmx-users] energy_group exclusions #SUKRITI GUPTA#
[gmx-users] exactly same rdfs for different residues Apramita Chand
[gmx-users] exactly same rdfs for different residues Mark Abraham
[gmx-users] Exactly same rdfs for different residues of protein with water Apramita Chand
[gmx-users] Exactly same rdfs for different residues of protein with water Mark Abraham
[gmx-users] Extending simulation, quick question Dario Akaberi
[gmx-users] Extending simulation, quick question Justin Lemkul
[gmx-users] ffnonbonded.itp chemocev marker
[gmx-users] Force field for ion-carbon interaction Maryam Kowsar
[gmx-users] Force field for ion-carbon interaction Alex
[gmx-users] Force field for ion-carbon interaction Alex
[gmx-users] Force field for ion-carbon interaction Maryam Kowsar
[gmx-users] Force field for ion-carbon interaction Alex
[gmx-users] Force field for ion-carbon interaction Maryam Kowsar
[gmx-users] Force field for phosphorylated residues Seera Suryanarayana
[gmx-users] Force field for phosphorylated residues Mark Abraham
[gmx-users] Force field for phosphorylated residues Mark Abraham
[gmx-users] Force field transformation from Gromacs to Charmm format Dawid das
[gmx-users] Force field transformation from Gromacs to Charmm format Dawid das
[gmx-users] Force field transformation from Gromacs to Charmm format Justin Lemkul
[gmx-users] Force field transformation from Gromacs to Charmm format liming_52
[gmx-users] Force Fields Selection Syed Azeem
[gmx-users] Force Fields Selection Smith, Micholas D.
[gmx-users] Force filed for phosphorylated residues Seera Suryanarayana
[gmx-users] Force filed for phosphorylated residues Amir Zeb
[gmx-users] Force filed for phosphorylated residues Amir Zeb
[gmx-users] Force filed for phosphorylated residues Mark Abraham
[gmx-users] Force filed for phosphorylated residues Amir Zeb
[gmx-users] Force filed for phosphorylated residues Peter Stern
[gmx-users] Force filed for phosphorylated residues Justin Lemkul
[gmx-users] Force filed for phosphorylated residues Amir Zeb
[gmx-users] forcefield for phosphorylated residues Seera Suryanarayana
[gmx-users] forcefield for phosphorylated residues Justin Lemkul
[gmx-users] Found solution to the problem of same rdfs for different residues Apramita Chand
[gmx-users] Free Energy Landscape- PCA Romero, Raquel
[gmx-users] Free Energy Landscape- PCA Romero, Raquel
[gmx-users] Free Energy Landscape- PCA Justin Lemkul
[gmx-users] Free Energy Landscape- PCA Romero, Raquel
[gmx-users] Free Energy Landscape- PCA Justin Lemkul
[gmx-users] Free Energy Landscape- PCA Romero, Raquel
[gmx-users] Free Energy Landscape- PCA Mark Abraham
[gmx-users] free energy settings Qasim Pars
[gmx-users] free energy settings Justin Lemkul
[gmx-users] Fwd: order parameters is more than one Karim Mahnam
[gmx-users] g-C3N4 GROMOS parameters Morten
[gmx-users] gmx distance -- gmx: double free or corruption Christopher Neale
[gmx-users] gmx insert-molecules not adding the required number of molecules Mark Abraham
[gmx-users] Gomacs and multiple GPU Nikhil Maroli
[gmx-users] Gomacs and multiple GPU Mark Abraham
[gmx-users] Gomacs and multiple GPU Alexis Michon
[gmx-users] Gomacs and multiple GPU Szilárd Páll
[gmx-users] Gomacs and multiple GPU Alexis Michon
[gmx-users] Gomacs and multiple GPU Szilárd Páll
[gmx-users] Gomacs and multiple GPU Alexis Michon
[gmx-users] Gomacs and multiple GPU Szilárd Páll
[gmx-users] Gomacs and multiple GPU Alexis Michon
[gmx-users] Gradual deformation of position-restrained structure Alex
[gmx-users] Gradual deformation of position-restrained structure Mark Abraham
[gmx-users] Gradual deformation of position-restrained structure Alex
[gmx-users] Gradual deformation of position-restrained structure Mark Abraham
[gmx-users] Gradual deformation of position-restrained structure Mark Abraham
[gmx-users] Gradual deformation of position-restrained structure Alex
[gmx-users] Gradual deformation of position-restrained structure Alex
[gmx-users] GROMACS 5.1.2 performance Neha Gandhi
[gmx-users] GROMACS 5.1.2 performance Justin Lemkul
[gmx-users] GROMACS 5.1.2 performance Mark Abraham
[gmx-users] Gromacs Learning Sheikh Imamul Hossain
[gmx-users] Gromacs Learning Marlon Sidore
[gmx-users] gromacs.org_gmx-users Digest, Vol 152, Issue 61 Michael K. Gilson
[gmx-users] gromacs.org_gmx-users Digest, Vol 152, Issue 93 Syed Azeem
[gmx-users] hbond Gregory Poon
[gmx-users] hbond Justin Lemkul
[gmx-users] Hbonds analysis Khadija Amine
[gmx-users] Hbonds analysis Amir Zeb
[gmx-users] Hbonds analysis Dario Akaberi
[gmx-users] Hbonds analysis Khadija Amine
[gmx-users] Hi, how can I get the number density value to the centre of mass? Thanks! 曲广淼
[gmx-users] Homology model refinement Amir Zeb
[gmx-users] Homology model refinement Mark Abraham
[gmx-users] Homology model refinement Amir Zeb
[gmx-users] Homology model refinement Mark Abraham
[gmx-users] Homology model refinement Amir Zeb
[gmx-users] Homology model refinement Mijiddorj Batsaikhan
[gmx-users] Homology model refinement Amir Zeb
[gmx-users] how to compute charged carried by a single residue Amir Zeb
[gmx-users] how to compute charged carried by a single residue Mark Abraham
[gmx-users] how to compute charged carried by a single residue Amir Zeb
[gmx-users] how to compute charged carried by a single residue Mark Abraham
[gmx-users] how to compute charged carried by a single residue Amir Zeb
[gmx-users] How to extend my incompleted simulation? (not extend a completed one) Zhang, Cheng
[gmx-users] How to extend my incompleted simulation? (not extend a completed one) Alex
[gmx-users] How to extend my incompleted simulation? (not extend a completed one) Zhang, Cheng
[gmx-users] How to extend my incompleted simulation? (not extend a completed one) Justin Lemkul
[gmx-users] How to extend my incompleted simulation? (not extend a completed one) Zhang, Cheng
[gmx-users] How to extend my incompleted simulation? (not extend a completed one) Alex
[gmx-users] How to resolve OXT atom issue? Seera Suryanarayana
[gmx-users] How to resolve OXT atom issue? RAHUL SURESH
[gmx-users] How to resolve OXT atom issue? Justin Lemkul
[gmx-users] How to solve OXT atom (termial oxygen atom) issue? Seera Suryanarayana
[gmx-users] How to solve OXT atom (termial oxygen atom) issue? Justin Lemkul
[gmx-users] How to solve the OXT atom (terminal O atom) issue? Seera Suryanarayana
[gmx-users] How to solve the OXT atom (terminal O atom) issue? Justin Lemkul
[gmx-users] How to solve the terminal oxygen atom issue (OXT atom) ? Seera Suryanarayana
[gmx-users] How to solve the terminal oxygen atom issue (OXT atom) ? Justin Lemkul
[gmx-users] How to use Höltje's cholesterol parameters ? Sim gmx
[gmx-users] How to use Höltje's cholesterol parameters ? Sim gmx
[gmx-users] How to use Höltje's cholesterol parameters ? Sim gmx
[gmx-users] How to use Höltje's cholesterol parameters ? Thomas Piggot
[gmx-users] How to use Höltje's cholesterol parameters ? Sim gmx
[gmx-users] Implicit and Explicit solvation Syed Azeem
[gmx-users] Implicit and Explicit solvation Timofey Tyugashev
[gmx-users] Implicit and Explicit solvation Syed Azeem
[gmx-users] Implicit and Explicit solvation Justin Lemkul
[gmx-users] Implicit and Explicit solvation Syed Azeem
[gmx-users] Inconsistent shifts Mijiddorj Batsaikhan
[gmx-users] Inconsistent shifts Justin Lemkul
[gmx-users] Inconsistent shifts Mijiddorj Batsaikhan
[gmx-users] Inconsistent shifts Justin Lemkul
[gmx-users] Inconsistent shifts Mijiddorj Batsaikhan
[gmx-users] Lattice distance for HII phase Mohsen Ramezanpour
[gmx-users] Lattice distance for HII phase Mohsen Ramezanpour
[gmx-users] Lennard-Jones Wall ( help please ! ) Lamm Gro
[gmx-users] Ligand-protein free binding energy is become positive masoud aliyar
[gmx-users] Manual refinement of ATB topologies ? Sim gmx
[gmx-users] Manual refinement of ATB topologies ? Justin Lemkul
[gmx-users] Manual refinement of ATB topologies ? Sim gmx
[gmx-users] Manual refinement of ATB topologies ? Justin Lemkul
[gmx-users] Manual refinement of ATB topologies ? Sim gmx
[gmx-users] Manual refinement of ATB topologies ? Justin Lemkul
[gmx-users] Manual refinement of ATB topologies ? Sim gmx
[gmx-users] Manual refinement of ATB topologies ? Piggot T.
[gmx-users] Manual refinement of ATB topologies ? Sim gmx
[gmx-users] Manual refinement of ATB topologies ? Justin Lemkul
[gmx-users] Manual refinement of ATB topologies ? Sim gmx
[gmx-users] Manual refinement of ATB topologies ? Justin Lemkul
[gmx-users] Manual refinement of ATB topologies ? Sim gmx
[gmx-users] Manual refinement of ATB topologies ? Justin Lemkul
[gmx-users] martini lipids self-assembly pressure coupling Gmx QA
[gmx-users] martini lipids self-assembly pressure coupling Justin Lemkul
[gmx-users] Material science RAHUL SURESH
[gmx-users] Material science Mark Abraham
[gmx-users] material science RAHUL SURESH
[gmx-users] material science Mark Abraham
[gmx-users] Meaning of delta g in hydrogen bond lifetime column Apramita Chand
[gmx-users] Meaning of delta g in hydrogen bond lifetime column Justin Lemkul
[gmx-users] Merry Christmas from MemProtMD Tom Newport
[gmx-users] Merry Christmas from MemProtMD Mark Abraham
[gmx-users] Merry Christmas from MemProtMD Mark Abraham
[gmx-users] Merry Christmas from MemProtMD Stéphane Téletchéa
[gmx-users] multi node processing issue abhisek Mondal
[gmx-users] multi node processing issue Mark Abraham
[gmx-users] multi node processing issue Mark Abraham
[gmx-users] Need to search parameters. Sailesh Bataju
[gmx-users] Need to search parameters. Mark Abraham
[gmx-users] Need to search parameters. Mark Abraham
[gmx-users] Neighbor searching artifacts in permittivity when using shift Szilárd Páll
[gmx-users] Neutralization of the non solvated system Anurag Dobhal
[gmx-users] Neutralization of the non solvated system Justin Lemkul
[gmx-users] Neutralization of the non solvated system Anurag Dobhal
[gmx-users] New inGromacs Fredrick Oghenebrorie
[gmx-users] normalized Lovas, Sandor
[gmx-users] normalized Mark Abraham
[gmx-users] normalized Mark Abraham
[gmx-users] normalized overlap Lovas, Sandor
[gmx-users] normalized overlap Lovas, Sandor
[gmx-users] normalized overlap Mark Abraham
[gmx-users] optimum number of OpenMP threads for simulation Irem Altan
[gmx-users] optimum number of OpenMP threads for simulation Mark Abraham
[gmx-users] optimum number of OpenMP threads for simulation Irem Altan
[gmx-users] optimum number of OpenMP threads for simulation Mark Abraham
[gmx-users] optimum number of OpenMP threads for simulation Irem Altan
[gmx-users] optimum number of OpenMP threads for simulation Mark Abraham
[gmx-users] optimum number of OpenMP threads for simulation Irem Altan
[gmx-users] optimum number of OpenMP threads for simulation Mark Abraham
[gmx-users] Order Parameter with an all-atom force field Justin Lemkul
[gmx-users] order parameters for Inverted hexagonal phase Mohsen Ramezanpour
[gmx-users] order parameters is more than one Karim Mahnam
[gmx-users] order parameters is more than one Karim Mahnam
[gmx-users] parallel processing abhisek Mondal
[gmx-users] parallel processing jkrieger at mrc-lmb.cam.ac.uk
[gmx-users] parallel processing abhisek Mondal
[gmx-users] parallel processing Mark Abraham
[gmx-users] parallel processing abhisek Mondal
[gmx-users] parallel processing Mark Abraham
[gmx-users] Parameter suggestion for locating an Iron atom between two carbon ring and preventing system blow up Sajjad Kavyani
[gmx-users] Parameter suggestion for locating an Iron atom between two carbon ring and preventing system blow up Sajjad Kavyani
[gmx-users] Parameter suggestion for locating an Iron atom between two carbon ring and preventing system blow up Mark Abraham
[gmx-users] Parameter suggestion for locating an Iron atom between two carbon ring and preventing system blow up Sajjad Kavyani
[gmx-users] pdb2gmx vsites error reading atom name Vasiliu Tudor
[gmx-users] pdb2gmx vsites error reading atom name Sotirios Dionysios I. Papadatos
[gmx-users] PME Mark Abraham
[gmx-users] PMF changing drastically with the number of bins Sajeewa Pemasinghe
[gmx-users] PMF changing drastically with the number of bins Sajeewa Pemasinghe
[gmx-users] PMF decompostion Salman Zarrini
[gmx-users] PMF decompostion Christopher Neale
[gmx-users] PMF decompostion David van der Spoel
[gmx-users] PMF decompostion Salman Zarrini
[gmx-users] PMF decompostion Justin Lemkul
[gmx-users] PMF decompostion Salman Zarrini
[gmx-users] PMF decompostion Justin Lemkul
[gmx-users] problem Adel ASCHI
[gmx-users] Problem in mdrun tasneem kausar
[gmx-users] Problem in mdrun Mark Abraham
[gmx-users] Problem in mdrun Mark Abraham
[gmx-users] Problem in PMF simulation Billy Williams-Noonan
[gmx-users] Problem in PMF simulation Justin Lemkul
[gmx-users] Problem in PMF simulation Billy Williams-Noonan
[gmx-users] Problem in running energy minimization in Gromacs 5.1.2 version #SUKRITI GUPTA#
[gmx-users] Problem in running energy minimization in Gromacs 5.1.2 version #SUKRITI GUPTA#
[gmx-users] Problem in running energy minimization in Gromacs 5.1.2 version Mark Abraham
[gmx-users] Problem in running energy minimization in Gromacs 5.1.2 version #SUKRITI GUPTA#
[gmx-users] Problem in running energy minimization in Gromacs 5.1.2 version Mark Abraham
[gmx-users] Problem in running energy minimization in Gromacs 5.1.2 version #SUKRITI GUPTA#
[gmx-users] Problem in running energy minimization in Gromacs 5.1.2 version Mark Abraham
[gmx-users] protein ligand complex MD simulation ashan dayananda
[gmx-users] protein ligand complex MD simulation Sajeewa Pemasinghe
[gmx-users] Protein-Ligand Complex MD simulation Adarsh V. K.
[gmx-users] Protein-Ligand Complex MD simulation Adarsh V. K.
[gmx-users] Protein-Ligand Complex MD simulation Adarsh V. K.
[gmx-users] Protein-Ligand Complex MD simulation: Restrain protein alone or Restrain both protein and ligand during simulation? Adarsh V. K.
[gmx-users] Protein-Ligand Complex MD simulation: Restrain protein alone or Restrain both protein and ligand during simulation? Amir Zeb
[gmx-users] Protein-Peptide Simulation help Syed Azeem
[gmx-users] Protein-Peptide Simulation help Justin Lemkul
[gmx-users] Protein-Peptide Simulation help Syed Azeem
[gmx-users] Protonation state of phospho-tyrosine in neutral PH Zheng Ruan
[gmx-users] Protonation state of phospho-tyrosine in neutral PH Justin Lemkul
[gmx-users] Protonation state of phospho-tyrosine in neutral PH Zheng Ruan
[gmx-users] Query regarding hydrogen bond lifetime and energy Apramita Chand
[gmx-users] Re : gromacs.org_gmx-users Digest, Vol 152, Issue 55 Adel ASCHI
[gmx-users] Re. normalized overlap Lovas, Sandor
[gmx-users] Re. normalized overlap Mark Abraham
[gmx-users] Re. normalized overlap Mark Abraham
[gmx-users] Reading tpx file (md_0_1.tpr) version 110 with version 100 program Zhang, Cheng
[gmx-users] Reading tpx file (md_0_1.tpr) version 110 with version 100 program Alex
[gmx-users] Reading tpx file (md_0_1.tpr) version 110 with version 100 program Alex
[gmx-users] Regarding error in hydrogen bond lifetime Apramita Chand
[gmx-users] Removal of Waters in Hydrophobic Core Christopher Neale
[gmx-users] replica exchange: checkpoint file not getting generated Mark Abraham
[gmx-users] replica exchange: checkpoint file not getting generated shivangi nangia
[gmx-users] Should I restrain omega dihedrals or just phi/psi? Daniel Bauer
[gmx-users] Should I restrain omega dihedrals or just phi/psi? Justin Lemkul
[gmx-users] Specs for GPU box Alex
[gmx-users] static compilation - various problems... Krzysztof Piszczek
[gmx-users] static compilation - various problems... Mark Abraham
[gmx-users] Strange pressure coupling behaviour, rapid expanding box Kamps, M.
[gmx-users] Strange pressure coupling behaviour, rapid expanding box Kamps, M.
[gmx-users] Strange pressure coupling behaviour, rapid expanding box Justin Lemkul
[gmx-users] Strange pressure coupling behaviour, rapid expanding box Justin Lemkul
[gmx-users] Subject: Molecule is breaking during energy minimization Mark Abraham
[gmx-users] Subject: Molecule is breaking during energy minimization Mark Abraham
[gmx-users] Subject: Molecule is breaking during energy minimization Emine Deniz Tekin
[gmx-users] Subject: Molecule is breaking during energy minimization Emine Deniz Tekin
[gmx-users] Suitable techniques of self-assembly studies Mijiddorj Batsaikhan
[gmx-users] system blowing up abhisek Mondal
[gmx-users] system blowing up Justin Lemkul
[gmx-users] TIP3 water problem nikolaev at spbau.ru
[gmx-users] TIP3 water problem Justin Lemkul
[gmx-users] TIP3 water problem nikolaev at spbau.ru
[gmx-users] TIP3 water problem Justin Lemkul
[gmx-users] TIP3 water problem nikolaev at spbau.ru
[gmx-users] TIP3 water problem Mark Abraham
[gmx-users] TIP3 water problem nikolaev at spbau.ru
[gmx-users] TIP3 water problem Justin Lemkul
[gmx-users] To trjcat or not to trjcat Alex
[gmx-users] To trjcat or not to trjcat Justin Lemkul
[gmx-users] To trjcat or not to trjcat Alex
[gmx-users] To trjcat or not to trjcat Mark Abraham
[gmx-users] To trjcat or not to trjcat Alex
[gmx-users] trajectory analysis maria khan
[gmx-users] trajectory analysis Justin Lemkul
[gmx-users] trjconv sampling according to a list of arbitrary times Mark Abraham
[gmx-users] trjconv sampling according to a list of arbitrary times Christopher Neale
[gmx-users] trjconv sampling according to a list of arbitrary times Irem Altan
[gmx-users] ultrasonic aghaei.arsalan
[gmx-users] ultrasonic aghaei.arsalan
[gmx-users] ultrasonic Mark Abraham
[gmx-users] ultrasonic Mark Abraham
[gmx-users] Unanswered Query regarding hydrogen bond lifetime and energy Apramita Chand
[gmx-users] Unstable Alpha Helix amitbehra at chemeng.iisc.ernet.in
[gmx-users] Unstable Alpha Helix Justin Lemkul
[gmx-users] Unstable Alpha Helix amitbehra at chemeng.iisc.ernet.in
[gmx-users] Unstable Alpha Helix Mark Abraham
[gmx-users] Using GROMACS with (AMD) OpenCL Gregory Man Kai Poon
[gmx-users] Using GROMACS with (AMD) OpenCL melichercik at leaf.nh.cas.cz
[gmx-users] Using GROMACS with (AMD) OpenCL Szilárd Páll
[gmx-users] Using GROMACS with (AMD) OpenCL Gregory Man Kai Poon
[gmx-users] Using GROMACS with (AMD) OpenCL Szilárd Páll
[gmx-users] Using GROMACS with (AMD) OpenCL Gregory Man Kai Poon
[gmx-users] Using GROMACS with (AMD) OpenCL Szilárd Páll
[gmx-users] using implicit water for atomistic simulation of lipid bilayer Mohsen Ramezanpour
[gmx-users] using implicit water for atomistic simulation of lipid bilayer Justin Lemkul
[gmx-users] using implicit water for atomistic simulation of lipid bilayer Mohsen Ramezanpour
[gmx-users] Vagrant 2-node slurm cluster with gromacs, mpi Jan Domanski
[gmx-users] Vagrant 2-node slurm cluster with gromacs, mpi Mark Abraham
[gmx-users] Vagrant 2-node slurm cluster with gromacs, mpi Mark Abraham
[gmx-users] Vagrant 2-node slurm cluster with gromacs, mpi Victor Rosas Garcia
[gmx-users] Vagrant 2-node slurm cluster with gromacs, mpi Mark Abraham
[gmx-users] Vagrant 2-node slurm cluster with gromacs, mpi Victor Rosas Garcia
[gmx-users] where do Zinc parameters come from ? CROUZY Serge 119222
[gmx-users] where do Zinc parameters come from ? Justin Lemkul
[gmx-users] Why is Continuous hydrogen bond lifetime so low? Apramita Chand
[gmx-users] xtc to dcd conversion Amir Zeb
[gmx-users] xtc to dcd conversion Justin Lemkul

Last message date: Fri Dec 30 17:58:21 CET 2016
Archived on: Fri Dec 30 17:58:22 CET 2016

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