[gmx-users] ultrasonic

Mark Abraham mark.j.abraham at gmail.com
Sat Dec 17 23:14:05 CET 2016


You'd have to produce a series of alternating compressions and
rarefactions, but there's no code that generates that. You'd also have to
consider whether you can simulate enough particles to get to observe the
behaviour in bulk matter.


On Sun, Dec 18, 2016 at 12:38 AM aghaei.arsalan <aghaei.arsalan at ut.ac.ir>

> Dear Sir/Madam
> I want to do a simulation using Gromacs by applying ultrasonic treatment
> on my protein.
> does anybody know how to introduce ultrasonic sound wave in MD
> simulation input files?
> Best Regards
> --
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