[gmx-users] what means of contact in mindist?

[masoud keramati]

tnx dear tsjerk

can i use this option for analysis of  hydrophobic interaction?
is distance 0.6 nm good choice for this purpose?

On Mon, Feb 1, 2016 at 4:14 PM, Tsjerk Wassenaar <tsjerkw at gmail.com> wrote:

> Hey :)
>
> It tells how many pairs of atoms lie within a distance r (typically 0.6
> nm).
>
> Cheers,
>
> Tsjerk
>
> On Mon, Feb 1, 2016 at 1:08 PM, masoud keramati <keramati.ma3oud at gmail.com
> >
> wrote:
>
> > Hi all
> >
> > what means of "number of contact" in  gmx mindist command?
> >
> > what we can understand from it's result?
> >
> >
> >
> > Best
> > --
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>
> --
> Tsjerk A. Wassenaar, Ph.D.
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