[gmx-users] fatal error.Atomtype LC3 not found.

[Justin Lemkul]

On 2/8/16 12:09 AM, Waqas khan wrote:
> Dear  gromacs expert !
>
> I want to insert the GPCR protein in POPC bilayer but getting fatal error.
> I am using Charrm36 force field. I am new to MD simulation.
>
>
>
>
>
> *Fatal error:Atomtype LC3 not foundFor more information and tips for
> troubleshooting, please check the GROMACSwebsite at
> http://www.gromacs.org/Documentation/Errors

LC3 is not a CHARMM atom type.  Don't mix and match force fields.

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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