[gmx-users] calculate *all* carbon atom distances over time?

Athina Meletiou enxam16 at nottingham.ac.uk
Mon Feb 15 18:58:13 CET 2016


Thank you for the clarification, Justin.

Does gmx distance also work in the same way? In its reference manual I see that it supports an -oall option ("-oall writes all the individual distances"), so could it be that it can print the distances between all atoms without the need of the extra processing (script and index file) that g_dist needs?

Best regards,
Athina




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