[gmx-users] Error message in Energy minimization
Deep Bhattacharya
hypergenetics at gmail.com
Wed Jul 13 17:37:57 CEST 2016
Hello,
This is the error message that I am getting trying to run energy
minimization
ERROR 1 [file em.mdp]:
With coulombtype = PME (without modifier), rcoulomb must be equal to
rlist,
or rlistlong if nstcalclr=1. For optimal energy conservation,consider
using
a potential modifier.
em.mdp
; minim.mdp - used as input into grompp to generate em.tpr
define = -DPOSRES -DPOSRES_LIGAND
integrator = steep
emtol = 1000.0
emstep = 0.01
nsteps = 500000
energygrps = System
nstlist = 1
rlist = 1.4
ns_type = grid
coulombtype = PME
rcoulomb = 0.9
vdwtype = cut-off
rvdw = 1.4
pbc = xyz
epsilon-rf = 61
Please help.
*Deep S Bhattacharya*
*Graduate Research Assistant*
Mohs Biomedical Imaging & Nanotechnology Group
Pharmaceutical Sciences
*University of Nebraska Medical Center*
4018 Eppley Science Hall | Omaha, NE 68198-6805
office 402.559.4349 | cell 402.906.1640
deep.bhattacharya at unmc.edu.deep.bhattacharya199@gmail.com
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