[gmx-users] Error from re-running the trajs

Mark Abraham mark.j.abraham at gmail.com
Thu Jul 28 21:40:49 CEST 2016


Hi,

That warning was intended for a different context, and will be removed in
the 2016 release. It stems from some of the infrastructure not being robust
enough to handle more than 2^31 steps, but that only affects the step
number, so pretty much doesn't matter.

Mark

On Thu, Jul 28, 2016 at 8:21 PM Hongbin Wan <tuf74538 at temple.edu> wrote:

> Hi all,
>
> I am  trying to re_run the trajectories to extract the potential energies,
> and it turned out some of the trajectories had errors like the followings:
>
> WARNING: there may be something wrong with energy file r1.edr
>
> Found: step=-1349067296, nre=43, nblock=0, time=5.8918e+06.
>
> Trying to skip frame expect a crash though
>
> I thought it caused by the broken trajectories, and using gmx check says no
> broken points in the trajectories. Please help me out.
>
>
> Thanks.
>
> --Hongbin
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