[gmx-users] Help required for calculation of protein coverage % wrt time

[Antara mazumdar]

Dear gromacs users,

I have a peripheral membrane protein which I have simulated using Charmm 36
in a mixed lipids bilayer. I want to calculate the percentage of protein in
contact with membrane wrt time. I already have residue wise distances from
membrane calculated.

Can anyone suggest me how to go about it after this?

Antara Mazumdar

ISCB SC RSG-India

Core Committee Member