[gmx-users] Md simulation H-atom trajectory analysis.

[maria khan]

Dear justin
Thanks for your prompt response.
My results are satisfactory.and i managed the H-atoms by _ignh command.but
i just want to learn its solution by conventional system of gromacs also
thats y i am asking.
>From your answer can i say that H-atoms trajectory can be studied either it
is handle by -Ignh command or conventional system??
Before your answer i was thinking that by solving the h-atoms by _ignh
command i ll not be able to study the H-atom trajectory as the software has
ignord it.
Thanks for your honorable guidance.