[gmx-users] Fwd: Error-File must be an ascii script

[RAHUL SURESH]

Thank you

On Tue, 15 Nov 2016 at 5:47 PM, Mark Abraham <mark.j.abraham at gmail.com>
wrote:

> Hi,
>
> The list can't take attachments, so we can't see your script. You need to
> find out how to call the mpirun you're expected to use  - that's a problem
> you and every other user of your cluster needs solved, so please go and ask
> someone who can simultaneously solve the problem for you and for everyone
> else on the cluster. :-)
>
> Mark
>
> On Tue, Nov 15, 2016 at 12:12 PM RAHUL SURESH <drrahulsuresh at gmail.com>
> wrote:
>
> > Hi... this s my script file. And I am totally unaware of my cluster
> > documentation
> >
> > On Tue, Nov 15, 2016 at 1:40 PM, Mark Abraham <mark.j.abraham at gmail.com>
> > wrote:
> >
> > > Hi,
> > >
> > > No, because I can neither see your script nor read your documentation
> :-)
> > >
> > > Mark
> > >
> > > On Tue, 15 Nov 2016 09:09 RAHUL SURESH <drrahulsuresh at gmail.com>
> wrote:
> > >
> > > > Thank you. Let me check my cluster documentation. Anyway you can help
> > me
> > > to
> > > > correct my script?
> > > >
> > > > On Tue, 15 Nov 2016 at 1:35 PM, Mark Abraham <
> mark.j.abraham at gmail.com
> > >
> > > > wrote:
> > > >
> > > > > Hi,
> > > > >
> > > > > The error message is probably exactly right - you've incorrectly
> > > > specified
> > > > > the required argument to mpirun -np. This is not a gromacs problem
> -
> > > > check
> > > > > your script and consult your cluster's documentation.
> > > > >
> > > > > Mark
> > > > >
> > > > > On Tue, 15 Nov 2016 05:59 RAHUL SURESH <drrahulsuresh at gmail.com>
> > > wrote:
> > > > >
> > > > > > I want to run my .tpr file in cluster. I have my script file and
> > tpr
> > > > file
> > > > > > in a separate folder  in cluster. But it ends up with the error
> > > > > >
> > > > > > */var/spool/torque/mom_priv/jobs/25552.ramanujam.hpc.org.SC
> > > > > > <http://25552.ramanujam.hpc.org.SC>: line 8: 10: command not
> > found*
> > > > > >
> > > > > >
> > > > >
> > > > *-----------------------------------------------------------
> > > -----------------*
> > > > > > *Open MPI has detected that a parameter given to a command line*
> > > > > > *option does not match the expected format:*
> > > > > >
> > > > > > *  Option: np*
> > > > > > *  Param:  gmx_mpi*
> > > > > >
> > > > > > *This is frequently caused by omitting to provide the parameter*
> > > > > > *to an option that requires one. Please check the command line
> and
> > > try
> > > > > > again.*
> > > > > >
> > > > > >
> > > > >
> > > > *-----------------------------------------------------------
> > > -----------------*
> > > > > >
> > > > > >
> > > > > > here i have attached my script file.
> > > > > >
> > > > > > Await your help at the earliest Please.
> > > > > >
> > > > > > Thankyou
> > > > > >
> > > > > >
> > > > > >
> > > > > > --
> > > > > > *Regards,*
> > > > > > *Rahul Suresh*
> > > > > > *Research Scholar*
> > > > > > *Bharathiar University*
> > > > > > *Coimbatore*
> > > > > > --
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> > --
> > *Regards,*
> > *Rahul Suresh*
> > *Research Scholar*
> > *Bharathiar University*
> > *Coimbatore*
> > --
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