[gmx-users] Atom type 'OM' not found
jalemkul at vt.edu
Fri Sep 9 01:50:21 CEST 2016
On 9/8/16 6:03 AM, LAXMAN KUMAR wrote:
> hello users,
> I have done a pdb2gmx of a protein using force field.
> force field - *AMBER 03*
> water model -* SPC*
> Here is the error:
> Fatal error:
> *Atom type* OM (residue TYS) not found in atomtype database
OM is an atom type from GROMOS or CHARMM. If you're trying to use this type
with AMBER, you're likely mixing and matching force fields, which you should not do.
Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow
Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201
jalemkul at outerbanks.umaryland.edu | (410) 706-7441
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