[gmx-users] Software inconsistency error: Lost particles while sorting

Mark Abraham mark.j.abraham at gmail.com
Fri Aug 18 14:35:22 CEST 2017


There's not enough information for anybody to tell. Maybe you pulled too
hard, or with inappropriate settings.


On Thu, Aug 17, 2017 at 1:04 PM Alex Mathew <alexmathewmd at gmail.com> wrote:

> Dear all,
> I set up a simulation box, in which protein kept at the middle and one
> water molecule around the pore region of the protein. My aim is to pull
> water across the channel and get the energy diagram  (There are no other
> water molecules in the system). It shows an error while I execute the
> pull.tpr
> Software inconsistency error: Lost particles while sorting
> Can anyone tell me whats wrong here and any problem with my method?
> --
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