[gmx-users] phosphorylated protein parametrization

R C Dash rcdash0910 at gmail.com
Thu Dec 7 18:45:42 CET 2017


https://www.swisssidechain.ch/browse/family/table.php?family=all. Here you
can get all the gromaccs topology file  for phosphorylated THR ( Charmms FF)

On Thu, Dec 7, 2017 at 12:00 PM, <zeljko.svedruzic at biotech.uniri.hr> wrote:

> Hi folks,
> what do I need to do to run pdb2gmx with a protein pdb file that contains
> phosphorylated THR labeled as THP? I see several solutions but no of them
> look elegant. Does anybody have any experience with this,
> Thanks for any advice,
> Cheers,
> www.svedruziclab.com
>
> --
> Gromacs Users mailing list
>
> * Please search the archive at http://www.gromacs.org/
> Support/Mailing_Lists/GMX-Users_List before posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>


More information about the gromacs.org_gmx-users mailing list