December 2017 Archives by subject
Starting: Fri Dec 1 02:27:01 CET 2017
Ending: Sun Dec 31 16:20:11 CET 2017
Messages: 407
- [gmx-users] 2018-beta1: PME/GPU performance question
Szilárd Páll
- [gmx-users] 2018-beta1: PME/GPU performance question
Jochen Hub
- [gmx-users] [MGMS-DS]: Molecular Modelling Workshop March 12-14, 2018 in Erlangen, Germany
Harald Lanig
- [gmx-users] analyzing docking + MD results
MD
- [gmx-users] analyzing docking + MD results
Mark Abraham
- [gmx-users] analyzing docking + MD results
MD
- [gmx-users] analyzing docking + MD results
Mark Abraham
- [gmx-users] analyzing docking + MD results
MD
- [gmx-users] analyzing docking + MD results
MD
- [gmx-users] Atom HG1 not found in rtp database...
Vishwambhar Bhandare
- [gmx-users] Atom HG1 not found in rtp database...
RAHUL SURESH
- [gmx-users] Atom HG1 not found in rtp database...
Mark Abraham
- [gmx-users] BONDS BREAK DURING MINIMIZATION
Vidya R
- [gmx-users] BONDS BREAK DURING MINIMIZATION
Justin Lemkul
- [gmx-users] Can't read xxx bytes of pullf.xvg to compute checksum
Justin Lemkul
- [gmx-users] Can't read xxx bytes of pullf.xvg to compute checksum
Diez Fernandez, Amanda
- [gmx-users] CfP EuroVis 2018 Workshop on Molecular Graphics and Visual Analysis of Molecular Data
Björn Sommer
- [gmx-users] Complication of errors, .itp file regarding
RAHUL SURESH
- [gmx-users] Complication of errors, .itp file regarding
RAHUL SURESH
- [gmx-users] Complication of errors, .itp file regarding
Justin Lemkul
- [gmx-users] Complication of errors, .itp file regarding
RAHUL SURESH
- [gmx-users] Complication of errors, .itp file regarding
Justin Lemkul
- [gmx-users] Complication of errors, .itp file regarding
RAHUL SURESH
- [gmx-users] computing electric field for triclinic system
Mariia Savenko
- [gmx-users] computing electric field for triclinic system
Fakhar Alam
- [gmx-users] computing electric field for triclinic system
Fakhar Alam
- [gmx-users] computing electric field for triclinic system
Mark Abraham
- [gmx-users] computing electric field for triclinic system
Mariia Savenko
- [gmx-users] Contact maps using COM distance
Roshan Shrestha
- [gmx-users] Conversion of charmm36 parameters from namd to gromacs
Daniel Bauer
- [gmx-users] Conversion of charmm36 parameters from namd to gromacs
Justin Lemkul
- [gmx-users] Conversion of charmm36 parameters from namd to gromacs
Daniel Bauer
- [gmx-users] Conversion of charmm36 parameters from namd to gromacs
Justin Lemkul
- [gmx-users] Conversion of charmm36 parameters from namd to gromacs
Daniel Bauer
- [gmx-users] Conversion of charmm36 parameters from namd to gromacs
Justin Lemkul
- [gmx-users] Conversion of charmm36 parameters from namd to gromacs
Daniel Bauer
- [gmx-users] Conversion of charmm36 parameters from namd to gromacs
Justin Lemkul
- [gmx-users] couple-moltype
Jo
- [gmx-users] couple-moltype
Mark Abraham
- [gmx-users] Creating a chain of homo polymer from a non standard residue
Janakiraman Balachandran
- [gmx-users] Creating a chain of homo polymer from a non standard residue
Janakiraman Balachandran
- [gmx-users] determine surface tension
kordzadeh at aut.ac.ir
- [gmx-users] determine surface tension
kordzadeh at aut.ac.ir
- [gmx-users] determine surface tension on carbon nanotube
azadeh kordzadeh
- [gmx-users] determine surface tension on carbon nanotube
kordzadeh at aut.ac.ir
- [gmx-users] determining the unbinding path
abhisek Mondal
- [gmx-users] determining the unbinding path
abhisek Mondal
- [gmx-users] determining the unbinding path
Justin Lemkul
- [gmx-users] dielectric constant effect on protein, dna, water interface
Sarath Chandra
- [gmx-users] different pull force constants
Srinivasa Ramisetti
- [gmx-users] Distances calculation in umbrella sampling
Kingsley Theras Primus Dass .
- [gmx-users] Distances calculation in umbrella sampling
Amir Zeb
- [gmx-users] DSSP
Vidya R
- [gmx-users] DSSP
Vytautas Rakeviius
- [gmx-users] DSSP
João Henriques
- [gmx-users] DSSP
Vidya R
- [gmx-users] DSSP
João Henriques
- [gmx-users] DSSP
Vidya R
- [gmx-users] DSSP
Mark Abraham
- [gmx-users] DSSP
João Henriques
- [gmx-users] DSSP installation
spss4 at iacs.res.in
- [gmx-users] DSSP installation
João Henriques
- [gmx-users] DSSP installation
spss4 at iacs.res.in
- [gmx-users] DSSP installation
spss4 at iacs.res.in
- [gmx-users] DSSP installation
João Henriques
- [gmx-users] Dynamic selection of a shell in a trajectory
Matteo Busato
- [gmx-users] Dynamic selection of a shell in a trajectory
João Henriques
- [gmx-users] Dynamic selection of a shell in a trajectory
Mark Abraham
- [gmx-users] evaluating stability
Dave M
- [gmx-users] Extending MD simulations
Pandya, Akash
- [gmx-users] Extending MD simulations
Justin Lemkul
- [gmx-users] Extending MD simulations
Qinghua Liao
- [gmx-users] Extending MD simulations
soumadwip ghosh
- [gmx-users] FaQ paramters for ADP topology with acpype
Robert König
- [gmx-users] Fatal error from grommp in gromacs 5.0.4
James
- [gmx-users] Fatal error from grommp in gromacs 5.0.4
Mark Abraham
- [gmx-users] Fatal error from grommp in gromacs 5.0.4
Alexandr Nasedkin
- [gmx-users] Fatal error from grommp in gromacs 5.0.4
James
- [gmx-users] Fatal error in grompp
James
- [gmx-users] force field packages
Zahedeh Bashardanesh
- [gmx-users] force field packages
Mark Abraham
- [gmx-users] Free energy perturbation - table extension and blowing system
Krzysztof Makuch
- [gmx-users] Free energy perturbation - table extension and blowing system
Krzysztof Makuch
- [gmx-users] Fwd: lost particles while sorting
soumadwip ghosh
- [gmx-users] Fwd: lost particles while sorting
Mark Abraham
- [gmx-users] G-mmpbsa
Nikhil Maroli
- [gmx-users] g_mindsit contact analysis
soumadwip ghosh
- [gmx-users] g_sham experimental weighting with temperature
Yasser Bruno Ruiz Blanco
- [gmx-users] g_sham experimental weighting with temperature
Yasser Bruno Ruiz Blanco
- [gmx-users] g_sham experimental weighting with temperature
Yasser Bruno Ruiz Blanco
- [gmx-users] gmx sasa
Sudip Das
- [gmx-users] gmx sasa
Sudip Das
- [gmx-users] graphene wall piston acceleration simulation
Tam, Benjamin
- [gmx-users] Gromacs 2018 beta: g_membed broken?
Daniel Bauer
- [gmx-users] Gromacs 2018 beta: g_membed broken?
Mark Abraham
- [gmx-users] Gromacs 2018 beta: g_membed broken?
Mark Abraham
- [gmx-users] GROMACS 2018 first release candidate
Mark Abraham
- [gmx-users] GROMACS 2018 second beta
Mark Abraham
- [gmx-users] GROMACS 2018 second beta
Ali Ahmed
- [gmx-users] GROMACS 2018 third beta release
Mark Abraham
- [gmx-users] Gromacs 2018b1: Computing PME on GPUs
Jernej Zidar
- [gmx-users] Gromacs 2018b1: Computing PME on GPUs
Alex
- [gmx-users] Gromacs 2018b1: Computing PME on GPUs
Mark Abraham
- [gmx-users] Gromacs 2018b1: Computing PME on GPUs
Szilárd Páll
- [gmx-users] GROMACS 5.1.5 released - final release of that series
Mark Abraham
- [gmx-users] Grompp error : Incorrect number of parameters
RAHUL SURESH
- [gmx-users] Grompp error : Incorrect number of parameters
RAHUL SURESH
- [gmx-users] Grompp error : Incorrect number of parameters
Justin Lemkul
- [gmx-users] Grompp error : Incorrect number of parameters
Mark Abraham
- [gmx-users] Grompp error : Incorrect number of parameters
RAHUL SURESH
- [gmx-users] Grompp error : Incorrect number of parameters
Mark Abraham
- [gmx-users] Grompp error : Incorrect number of parameters
RAHUL SURESH
- [gmx-users] Grompp error : Incorrect number of parameters
Mark Abraham
- [gmx-users] Grompp error : Incorrect number of parameters
RAHUL SURESH
- [gmx-users] Grompp error : Incorrect number of parameters
Alex
- [gmx-users] Grompp error : Incorrect number of parameters
RAHUL SURESH
- [gmx-users] Grompp error : Incorrect number of parameters
RAHUL SURESH
- [gmx-users] Grompp error : Incorrect number of parameters
Mark Abraham
- [gmx-users] Help to interpret the energy terms for gmx energy
Jose
- [gmx-users] Help to interpret the energy terms for gmx energy
Mark Abraham
- [gmx-users] help with wham analysis
Srinivasa Ramisetti
- [gmx-users] How do I calculate per-atom per-frame SASA?
Denny Bromley
- [gmx-users] How the index is recognised for values more than 99999?
Mark Abraham
- [gmx-users] How the index is recognised for values more than 99999?
Mark Abraham
- [gmx-users] How the index is recognised for values more than 99999?
ZHANG Cheng
- [gmx-users] How the index is recognised for values more than 99999?
ZHANG Cheng
- [gmx-users] How the index is recognised for values more than 99999?
ZHANG Cheng
- [gmx-users] How the index is recognised for values more than 99999?
Justin Lemkul
- [gmx-users] how to creat new.rtp for acetylated lysine (ALY)
Mehreen Jan
- [gmx-users] how to creat new.rtp for acetylated lysine (ALY)
Justin Lemkul
- [gmx-users] How to run MD with longer recording interval to reduce the file size?
ZHANG Cheng
- [gmx-users] How to run MD with longer recording interval to reduce the file size?
ZHANG Cheng
- [gmx-users] How to run MD with longer recording interval to reduce the file size?
ZHANG Cheng
- [gmx-users] How to run MD with longer recording interval to reduce the file size?
Qinghua Liao
- [gmx-users] How to run MD with longer recording interval to reduce the file size?
Justin Lemkul
- [gmx-users] How to run MD with longer recording interval to reduce the file size?
Qinghua Liao
- [gmx-users] How to run MD with longer recording interval to reduce the file size?
Qinghua Liao
- [gmx-users] Hydrophobic and hydrophilic SASA for a particular portion of a protein
Sudip Das
- [gmx-users] Hydrophobic and hydrophilic SASA for a particular portion of a protein
RAHUL SURESH
- [gmx-users] Hydrophobic and hydrophilic SASA for a particular portion of a protein
Justin Lemkul
- [gmx-users] Hydrophobic and hydrophilic SASA for a particular portion of a protein
Sudip Das
- [gmx-users] Hydrophobic and hydrophilic SASA for a particular portion of a protein
Justin Lemkul
- [gmx-users] Hydrophobic and hydrophilic SASA for a particular portion of a protein
Sudip Das
- [gmx-users] Hydrophobic and hydrophilic SASA for a particular portion of a protein
Sudip Das
- [gmx-users] Hydrophobic and hydrophilic SASA for a particular portion of a protein
Justin Lemkul
- [gmx-users] Hydrophobic and hydrophilic SASA for a particular portion of a protein
Sudip Das
- [gmx-users] Insertion of Ion-channels onto the membrane using g_membed with Amber force field
Dhaniram Mahato
- [gmx-users] Insertion of Ion-channels onto the membrane using g_membed with Amber force field
Mark Abraham
- [gmx-users] Insertion of Ion-channels onto the membrane using g_membed with Amber force field
Mark Abraham
- [gmx-users] Insertion of Ion-channels onto the membrane using g_membed with Amber force field
Dhaniram Mahato
- [gmx-users] Insertion of Ion-channels onto the membrane using g_membed with Amber force field
Mark Abraham
- [gmx-users] Installing gromacs on the windows 10 linux subsystem
A. Alamir
- [gmx-users] Installing gromacs on the windows 10 linux subsystem
Dan Gil
- [gmx-users] Installing gromacs on the windows 10 linux subsystem
A. Alamir
- [gmx-users] Installing gromacs on the windows 10 linux subsystem
P C Kroon
- [gmx-users] Installing gromacs on the windows 10 linux subsystem
A. Alamir
- [gmx-users] Issue regarding MN+2
Amir Zeb
- [gmx-users] Issue regarding MN+2
Justin Lemkul
- [gmx-users] Issue regarding MN+2
Amir Zeb
- [gmx-users] Issue regarding MN+2
Justin Lemkul
- [gmx-users] Issue regarding MN+2
Amir Zeb
- [gmx-users] Issue regarding MN+2
RAHUL SURESH
- [gmx-users] Issue regarding MN+2
Alexandr Nasedkin
- [gmx-users] Issue regarding MN+2
Justin Lemkul
- [gmx-users] Link atoms issue: QMMM simulation
Zachary Smithline
- [gmx-users] Link atoms issue: QMMM simulation (Zachary Smithline)
Groenhof, Gerrit
- [gmx-users] lipid bilayer simulation-simulation setup
Mohsen Ramezanpour
- [gmx-users] lipid bilayer simulation-simulation setup
Mohsen Ramezanpour
- [gmx-users] lost particles while sorting
soumadwip ghosh
- [gmx-users] Measuring distance to the nearest image
Anthony Nash
- [gmx-users] Measuring distance to the nearest image
Anthony Nash
- [gmx-users] Measuring distance to the nearest image
Peter Kroon
- [gmx-users] Measuring distance to the nearest image
Alexandr Nasedkin
- [gmx-users] Measuring distance to the nearest image
Mark Abraham
- [gmx-users] Measuring distance to the nearest image
Anthony Nash
- [gmx-users] Measuring distance to the nearest image
Anthony Nash
- [gmx-users] Measuring distance to the nearest image
Mark Abraham
- [gmx-users] Measuring distance to the nearest image
Anthony Nash
- [gmx-users] Measuring distance to the nearest image
Mark Abraham
- [gmx-users] Metal-Protein interactions
RAHUL SURESH
- [gmx-users] Metal-Protein interactions
Justin Lemkul
- [gmx-users] Metal-Protein interactions
RAHUL SURESH
- [gmx-users] Metal-Protein interactions
Justin Lemkul
- [gmx-users] Metal-Protein interactions
RAHUL SURESH
- [gmx-users] Metal-Protein interactions
Justin Lemkul
- [gmx-users] Modify source file for specific use
deepak bapat
- [gmx-users] Modify source file for specific use
Mark Abraham
- [gmx-users] Modify source file for specific use
deepak bapat
- [gmx-users] modifying aminoacids.n.tdb in amber14sb.ff
Simon Kit Sang Chu
- [gmx-users] modifying aminoacids.n.tdb in amber14sb.ff
Justin Lemkul
- [gmx-users] More dihedrals generated than provided in the force field & "No default Proper Dih. types" as a result
Timofey Tyugashev
- [gmx-users] More dihedrals generated than provided in the force field & "No default Proper Dih. types" as a result
Justin Lemkul
- [gmx-users] More dihedrals generated than provided in the, force field & "No default Proper Dih. types" as a result
Timofey Tyugashev
- [gmx-users] MPI-specific compile problem finding fftwf_plan_r2r_1d in libfftw3f.a -- undefined reference to `_intel_fast_memset'
Christopher Neale
- [gmx-users] MPI-specific compile problem finding fftwf_plan_r2r_1d in libfftw3f.a -- undefined reference to `_intel_fast_memset'
Christopher Neale
- [gmx-users] my minimization structure looks like a messy box?
MD
- [gmx-users] my minimization structure looks like a messy box?
Justin Lemkul
- [gmx-users] my minimization structure looks like a messy box?
MD
- [gmx-users] my minimization structure looks like a messy box?
Justin Lemkul
- [gmx-users] my minimization structure looks like a messy box?
Shi Li
- [gmx-users] my minimization structure looks like a messy box?
Justin Lemkul
- [gmx-users] my minimization structure looks like a messy box?
MD
- [gmx-users] my minimization structure looks like a messy box?
Dilip H N
- [gmx-users] Non bonded parameters
Anjana Jayasinghe
- [gmx-users] Non bonded parameters
Justin Lemkul
- [gmx-users] Non bonded parameters
Anjana Jayasinghe
- [gmx-users] Non bonded parameters
Justin Lemkul
- [gmx-users] non-bonded potential
Velia Minicozzi
- [gmx-users] nvt wouldn't run even after fixing the pdb file
MD
- [gmx-users] nvt wouldn't run even after fixing the pdb file
Dallas Warren
- [gmx-users] one protein and 4 ligands
Mahboobeh Eslami
- [gmx-users] one protein and 4 ligands
Justin Lemkul
- [gmx-users] one protein and 4 ligands
Mahboobeh Eslami
- [gmx-users] one protein and 4 ligands
Justin Lemkul
- [gmx-users] openmpi execution using sbatch & mpirun every command executed several times
Vedat Durmaz
- [gmx-users] openmpi execution using sbatch & mpirun every command executed several times
Mark Abraham
- [gmx-users] openmpi execution using sbatch & mpirun every commandexecuted several times
P C Kroon
- [gmx-users] Osmotic Pressure Calculations and fixed reference values of walls
Mandar Kulkarni
- [gmx-users] Osmotic Pressure Calculations and fixed reference values of walls
Justin Lemkul
- [gmx-users] output - em.gro looks very strange
MD
- [gmx-users] output - em.gro looks very strange
Justin Lemkul
- [gmx-users] output - em.gro looks very strange
MD
- [gmx-users] output - em.gro looks very strange
MD
- [gmx-users] output - em.gro looks very strange
MD
- [gmx-users] Parameter file, regarding
RAHUL SURESH
- [gmx-users] Parameter file, regarding
RAHUL SURESH
- [gmx-users] Parameter file, regarding
Mark Abraham
- [gmx-users] Parameter file, regarding
RAHUL SURESH
- [gmx-users] Performance gains with AVX_512 ?
Kutzner, Carsten
- [gmx-users] Performance gains with AVX_512 ?
Szilárd Páll
- [gmx-users] Performance gains with AVX_512 ?
Kutzner, Carsten
- [gmx-users] phosphorylated protein parametrization
zeljko.svedruzic at biotech.uniri.hr
- [gmx-users] phosphorylated protein parametrization
R C Dash
- [gmx-users] phosphorylated protein parametrization
R C Dash
- [gmx-users] phosphorylated protein parametrization
Robert König
- [gmx-users] PME computation for triclinic box
Mariia Savenko
- [gmx-users] pressure coupling
kordzadeh at aut.ac.ir
- [gmx-users] pressure coupling
Justin Lemkul
- [gmx-users] Pressure through one direction
ali akgün
- [gmx-users] Pressure through one direction
Mark Abraham
- [gmx-users] Problem with topology generation by Amber 12 ff
Amir Zeb
- [gmx-users] Problem with topology generation by Amber 12 ff
Justin Lemkul
- [gmx-users] Problem with topology generation by Amber 12 ff
Amir Zeb
- [gmx-users] Problems with Energy Minimization in Solvated Ligand
Toan Nguyen
- [gmx-users] Problems with Energy Minimization in Solvated Ligand
Justin Lemkul
- [gmx-users] Problems with Energy Minimization in Solvated Ligand
Toan Nguyen
- [gmx-users] Problems with Energy Minimization in Solvated Ligand
Justin Lemkul
- [gmx-users] Problems with Energy Minimization in Solvated Ligand
Toan Nguyen
- [gmx-users] Problems with Energy Minimization in Solvated Ligand
Justin Lemkul
- [gmx-users] Problems with Energy Minimization in Solvated Ligand
Toan Nguyen
- [gmx-users] Problems with Energy Minimization in Solvated Ligand
Billy Williams-Noonan
- [gmx-users] Problems with Energy Minimization in Solvated Ligand
Justin Lemkul
- [gmx-users] PROTEIN FOLDING
Neha Gupta
- [gmx-users] PROTEIN FOLDING
Nikhil Maroli
- [gmx-users] PROTEIN FOLDING
RAHUL SURESH
- [gmx-users] PROTEIN FOLDING
RAHUL SURESH
- [gmx-users] PROTEIN FOLDING
Neha Gupta
- [gmx-users] PROTEIN FOLDING
RAHUL SURESH
- [gmx-users] PROTEIN FOLDING
RAHUL SURESH
- [gmx-users] PROTEIN FOLDING
Neha Gupta
- [gmx-users] PROTEIN FOLDING
Aman Deep
- [gmx-users] PROTEIN FOLDING
João Henriques
- [gmx-users] PROTEIN FOLDING
Neha Gupta
- [gmx-users] PROTEIN FOLDING
João Henriques
- [gmx-users] PROTEIN FOLDING
Neha Gupta
- [gmx-users] PROTEIN FOLDING
RAHUL SURESH
- [gmx-users] PROTEIN FOLDING
Neha Gupta
- [gmx-users] PROTEIN FOLDING
Justin Lemkul
- [gmx-users] PROTEIN FOLDING
Lakshman Ji Verma
- [gmx-users] PROTEIN FOLDING
Neha Gupta
- [gmx-users] PROTEIN FOLDING
Justin Lemkul
- [gmx-users] PROTEIN FOLDING
Neha Gupta
- [gmx-users] PROTEIN FOLDING
Alexandr Nasedkin
- [gmx-users] PROTEIN FOLDING
Justin Lemkul
- [gmx-users] PROTEIN FOLDING
Neha Gupta
- [gmx-users] PROTEIN FOLDING
Justin Lemkul
- [gmx-users] protein fragmented issue for minimization
MD
- [gmx-users] protein fragmented issue for minimization
Justin Lemkul
- [gmx-users] protein fragmented issue for minimization
MD
- [gmx-users] protein fragmented issue for minimization
Justin Lemkul
- [gmx-users] protein peptide interaction
MD
- [gmx-users] protein peptide interaction
Justin Lemkul
- [gmx-users] protein peptide interaction
MD
- [gmx-users] question
s.ghasemlou
- [gmx-users] question
RAHUL SURESH
- [gmx-users] question
Nikhil Maroli
- [gmx-users] question
s.ghasemlou
- [gmx-users] question
s.ghasemlou
- [gmx-users] question
Nikhil Maroli
- [gmx-users] question
Justin Lemkul
- [gmx-users] question
RAHUL SURESH
- [gmx-users] question
Mark Abraham
- [gmx-users] question of perturbing order in single topology FEP, gromacs
asaffarhi at post.tau.ac.il
- [gmx-users] RADIAL DISTRIBUTION FUNTION
Neha Gupta
- [gmx-users] recognition two phase in gromacs
kordzadeh at aut.ac.ir
- [gmx-users] recognition two phase in gromacs
Mark Abraham
- [gmx-users] recognition two phase in gromacs
azadeh kordzadeh
- [gmx-users] regarding calculation of intra-residue energy
Saumyak Mukherjee
- [gmx-users] regarding calculation of intra-residue energy
Justin Lemkul
- [gmx-users] Regarding finding a ion/molecule in forecefield
Dilip H N
- [gmx-users] Regarding finding a ion/molecule in forecefield
Justin Lemkul
- [gmx-users] Regarding finding a ion/molecule in forecefield
Dilip H N
- [gmx-users] Regarding finding a ion/molecule in forecefield
Justin Lemkul
- [gmx-users] Regarding protocol of g_lie module
neha chaudhary
- [gmx-users] Regarding protocol of g_lie module
David van der Spoel
- [gmx-users] request
mmahmoudig at razi.tums.ac.ir
- [gmx-users] request
Justin Lemkul
- [gmx-users] request
mmahmoudig at razi.tums.ac.ir
- [gmx-users] request
mmahmoudig at razi.tums.ac.ir
- [gmx-users] request
mmahmoudig at razi.tums.ac.ir
- [gmx-users] request
Rakesh Pant
- [gmx-users] request
Dallas Warren
- [gmx-users] request
mmahmoudig at razi.tums.ac.ir
- [gmx-users] request
Mark Abraham
- [gmx-users] request
Mark Abraham
- [gmx-users] Ris: analyzing docking + MD results
andrea.spitaleri at iit.it
- [gmx-users] Same parameters for ADP single P-O bonds and double P=O bonds in in acpype (GAFF) topology
Robert König
- [gmx-users] Selection Error for RDF calculations
Pandya, Akash
- [gmx-users] Selection Error for RDF calculations
Justin Lemkul
- [gmx-users] Semipermeable membrane and pull code/flat bottom restraints for large molecules.
Thomas Underwood
- [gmx-users] Semipermeable membrane and pull code/flat bottom restraints for large molecules.
Mark Abraham
- [gmx-users] set computer time on REMD simulation
YanhuaOuyang
- [gmx-users] set computer time on REMD simulation
Qinghua Liao
- [gmx-users] set computer time on REMD simulation
YanhuaOuyang
- [gmx-users] Simulation of aggregated proteins
RAHUL SURESH
- [gmx-users] Simulation of aggregated proteins
João Henriques
- [gmx-users] Simulation of aggregated proteins
Mark Abraham
- [gmx-users] Simulation using disiloxane as a solvent
Akbar Shaikh
- [gmx-users] Simulation using disiloxane as a solvent
Mark Abraham
- [gmx-users] SPC model hydrogen bonding
atb files
- [gmx-users] SPC model hydrogen bonding
João Henriques
- [gmx-users] Step.pdb generated during energy minimization
vijayakumar gosu
- [gmx-users] Step.pdb generated during energy minimization
Justin Lemkul
- [gmx-users] Strange energy values with GMX 5.1, PME and Verlet
Diana Lousa
- [gmx-users] Strange energy values with GMX 5.1, PME and Verlet
Mark Abraham
- [gmx-users] Structures after Dihedral principle component analysis (dPCA)
soumadwip ghosh
- [gmx-users] Structures after Dihedral principle component analysis (dPCA)
soumadwip ghosh
- [gmx-users] Structures after Dihedral principle component analysis(dPCA)
Sundari
- [gmx-users] Surface tension from gmx energy
Own 12121325
- [gmx-users] The sign of deuterium order parameter calculated by g_order
Jason Zhu
- [gmx-users] The sign of deuterium order parameter calculated by g_order
Justin Lemkul
- [gmx-users] The sign of deuterium order parameter calculated by g_order
Thomas Piggot
- [gmx-users] The sum of the two largest charge group radii
Akbar Shaikh
- [gmx-users] The sum of the two largest charge group radii
Mark Abraham
- [gmx-users] The sum of the two largest charge group radii (32.555389) is larger than rlist
Aram Davtyan
- [gmx-users] The sum of the two largest charge group radii (32.555389) is larger than rlist
Mark Abraham
- [gmx-users] The sum of the two largest charge group radii (32.555389) is larger than rlist
Akbar Shaikh
- [gmx-users] The sum of the two largest charge group radii (X) is larger than rlist
Faezeh Pousaneh
- [gmx-users] The sum of the two largest charge group radii (X) is larger than rlist
Justin Lemkul
- [gmx-users] The sum of the two largest charge group radii (X) is larger than rlist
Faezeh Pousaneh
- [gmx-users] The sum of the two largest charge group radii (X) is larger than rlist
Faezeh Pousaneh
- [gmx-users] The sum of the two largest charge group radii (X) is larger than rlist
Justin Lemkul
- [gmx-users] The sum of the two largest charge group radii (X) is larger than rlist
Faezeh Pousaneh
- [gmx-users] to post on mailing list
Ladan Mafakhe
- [gmx-users] Topology file of molecule
Krzysztof Kolman
- [gmx-users] Topology file of molecule
Justin Lemkul
- [gmx-users] Topology file of molecule
Krzysztof Kolman
- [gmx-users] Topology for Charmm, regarding
RAHUL SURESH
- [gmx-users] trjcat options
bibhab majumdar
- [gmx-users] Tutorial for calculating diffusion from umbrella sampling
atb files
- [gmx-users] Umbrella sampling
rose rahmani
- [gmx-users] Umbrella sampling
rose rahmani
- [gmx-users] Umbrella sampling
Justin Lemkul
- [gmx-users] Umbrella sampling
Justin Lemkul
- [gmx-users] umbrella sampling
rose rahmani
- [gmx-users] Umbrella sampling
rose rahmani
- [gmx-users] Umbrella sampling
rose rahmani
- [gmx-users] Umbrella sampling
rose rahmani
- [gmx-users] Umbrella sampling
spss4 at iacs.res.in
- [gmx-users] Umbrella sampling
Dhaniram Mahato
- [gmx-users] Umbrella sampling
spss4 at iacs.res.in
- [gmx-users] Umbrella sampling
spss4 at iacs.res.in
- [gmx-users] Umbrella sampling
Jefferies D.F.
- [gmx-users] Umbrella sampling
Mark Abraham
- [gmx-users] Umbrella sampling
spss4 at iacs.res.in
- [gmx-users] Umbrella sampling
spss4 at iacs.res.in
- [gmx-users] Umbrella sampling
Jefferies D.F.
- [gmx-users] Umbrella sampling
Jefferies D.F.
- [gmx-users] Umbrella sampling simulation stopped in middle.
Sailesh Bataju
- [gmx-users] Umbrella sampling simulation stopped in middle.
Justin Lemkul
- [gmx-users] Unable to write whole trajectory with trjconv and error in gmx check
Dasgupta, R.
- [gmx-users] Usage of GROMACS
Momin Ahmad
- [gmx-users] Usage of GROMACS
Smith, Micholas D.
- [gmx-users] Usage of GROMACS
Momin Ahmad
- [gmx-users] Using custom potential for electrostatics between protein and water
Srinivasa Ramisetti
- [gmx-users] Using custom potential for electrostatics between protein and water
Aram Davtyan
- [gmx-users] Using custom potential for electrostatics between protein and water
Aram Davtyan
- [gmx-users] Using custom potential for electrostatics between protein and water
Aram Davtyan
- [gmx-users] Using custom potential for electrostatics between protein and water
Aram Davtyan
- [gmx-users] Using custom potential for electrostatics between protein and water
Mark Abraham
- [gmx-users] VMD Compatibility Question
Ethan Hsiao
- [gmx-users] VMD Compatibility Question
Alex
- [gmx-users] Volume-Temperature Replica Exchange
Daniel Kozuch
- [gmx-users] Volume-Temperature Replica Exchange
Mark Abraham
- [gmx-users] Volume-Temperature Replica Exchange
Mark Abraham
- [gmx-users] warning:Long Bond
Saleheh Heidari
- [gmx-users] warning:Long Bond
Justin Lemkul
- [gmx-users] WHAM
rose rahmani
- [gmx-users] WHAM
Roja
- [gmx-users] WHAM
Rose
- [gmx-users] WHAM
Justin Lemkul
- [gmx-users] WHAM
Alex
- [gmx-users] WHAM
rose rahmani
- [gmx-users] WHAM
João Henriques
- [gmx-users] WHAM
Alex
- [gmx-users] WHAM
Rose
- [gmx-users] widom TPI insertion
deepak bapat
Last message date:
Sun Dec 31 16:20:11 CET 2017
Archived on: Sun Dec 31 16:20:12 CET 2017
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