[gmx-users] VMD Compatibility Question

[Ethan Hsiao]

Users Charlie and I want to perform MD simulations on transition metal
nanoparticle interactions with different types of lipid rafts. Is it
possible to conduct a simulation on VMD with a gold nanoparticle built from
openMD with a lipid raft and cell membrane from GROMACS? Further, do you
have any advice on how to do a metal nanoparticle simulation with cell
membrane with GROMACS, NAMDm openMD, or whichever software your lab focuses
on?

Thank you,
Ethan