[gmx-users] Regarding topology...

Мижээ Батсайхан b.mijiddorj at gmail.com
Tue Feb 14 14:26:54 CET 2017

> ------------------------------
> Message: 6
> Date: Tue, 14 Feb 2017 16:11:40 +0530
> From: Dilip H N <cy16f01.dilip at nitk.edu.in>
> To: gmx-users at gromacs.org
> Subject: Re: [gmx-users] Regarding topology...
> Message-ID:
>         <CAD6GXy2oJxWPM4Qcgo_JZGVNZ1+BtpOtg5kFiX324hm2E6nr_A at mail.
> gmail.com>
> Content-Type: text/plain; charset=UTF-8
> How can i create a mixture of molecules and save it in .pdb format..?
> Is there any softwares for tht..?? or any software for pdb generator for
> gromacs..??
> Can anybody help...??
> you can use "gmx insert-molecules" (version 5 or later) for the mixture,
it needs pdb and topology files. you can use swissparam and prodrg server
etc. for generating topology depending on intended force field.

I don't know any special pdb generator for gromacs, because there are many
software. what kind of system do you need?


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